RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 TCF20Q9UGU0 1960 aaKnown RBP19.69■□□□□ 0.74
TPM4-206ENST00000587201 H3BQ06 376 aaPredicted RBP19.68■□□□□ 0.74
TPM4-206ENST00000587201 TOB1P50616 345 aaPredicted RBP19.68■□□□□ 0.74
TPM4-206ENST00000587201 UBE3AQ05086 875 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 HYAL1Q12794 435 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 LONRF3Q496Y0 759 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 HAUS3Q68CZ6 603 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 C4orf32Q8N8J7 132 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 MICAL1Q8TDZ2 1067 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 LPPQ93052 612 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 ZNF558Q96NG5 402 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 PCDHB6Q9Y5E3 794 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 TTC28Q96AY4 2481 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 MYO7AQ13402 2215 aa19.68■□□□□ 0.74
TPM4-206ENST00000587201 BRWD1Q9NSI6 2320 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 H3BQV1 296 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 ERLIN2O94905 339 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 RPA1P27694 616 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 ARL2P36404 184 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 FXR2P51116 673 aaKnown RBP eCLIP19.67■□□□□ 0.742e-7■□□□□ 10.7
TPM4-206ENST00000587201 PTENP60484 403 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 PTGDRQ13258 359 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 CAPSQ13938 189 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 POTEGQ6S5H5 508 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 KCNT2Q6UVM3 1135 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 MAEAQ7L5Y9 396 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.67■□□□□ 0.74
TPM4-206ENST00000587201 ASAP3Q8TDY4 903 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 PGBD4Q96DM1 585 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 MRPL9Q9BYD2 267 aaKnown RBP19.67■□□□□ 0.74
TPM4-206ENST00000587201 POLR3FQ9H1D9 316 aaPredicted RBP19.67■□□□□ 0.74
TPM4-206ENST00000587201 LRWD1Q9UFC0 647 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 DBR1Q9UK59 544 aaKnown RBP19.67■□□□□ 0.74
TPM4-206ENST00000587201 SMC3Q9UQE7 1217 aa19.67■□□□□ 0.74
TPM4-206ENST00000587201 ATG2AQ2TAZ0 1938 aa19.66■□□□□ 0.74
TPM4-206ENST00000587201 INO80B-WBP1J3KQ70 363 aa19.66■□□□□ 0.74
TPM4-206ENST00000587201 ZNF623O75123 536 aa19.66■□□□□ 0.74
TPM4-206ENST00000587201 GLRA2P23416 452 aa19.66■□□□□ 0.74
TPM4-206ENST00000587201 GTF2F1P35269 517 aaKnown RBP eCLIP19.66■□□□□ 0.741e-6■■■■□ 21.5
TPM4-206ENST00000587201 PBX3P40426 434 aa19.66■□□□□ 0.74
TPM4-206ENST00000587201 POU5F1BQ06416 359 aa19.66■□□□□ 0.74
TPM4-206ENST00000587201 COL19A1Q14993 1142 aa19.66■□□□□ 0.74
TPM4-206ENST00000587201 ADGRD2Q7Z7M1 963 aa19.66■□□□□ 0.74
TPM4-206ENST00000587201 TLR9Q9NR96 1032 aa19.66■□□□□ 0.74
TPM4-206ENST00000587201 PUF60Q9UHX1 559 aaKnown RBP19.66■□□□□ 0.74
TPM4-206ENST00000587201 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.66■□□□□ 0.74
TPM4-206ENST00000587201 PCDHB2Q9Y5E7 798 aa19.66■□□□□ 0.74
TPM4-206ENST00000587201 PLXNA4Q9HCM2 1894 aa19.65■□□□□ 0.74
TPM4-206ENST00000587201 HOXA11P31270 313 aaPredicted RBP19.65■□□□□ 0.74
TPM4-206ENST00000587201 PPM1AP35813 382 aa19.65■□□□□ 0.74
TPM4-206ENST00000587201 CCT6AP40227 531 aaKnown RBP19.65■□□□□ 0.74
TPM4-206ENST00000587201 PLCB3Q01970 1234 aa19.65■□□□□ 0.74
TPM4-206ENST00000587201 NCBP1Q09161 790 aaKnown RBP19.65■□□□□ 0.74
TPM4-206ENST00000587201 PCBP1Q15365 356 aaKnown RBP eCLIP19.65■□□□□ 0.74
TPM4-206ENST00000587201 PTCRAQ6ISU1 281 aaPredicted RBP19.65■□□□□ 0.74
TPM4-206ENST00000587201 GLB1LQ6UWU2 654 aa19.65■□□□□ 0.74
TPM4-206ENST00000587201 RBM23Q86U06 439 aaKnown RBP19.65■□□□□ 0.74
TPM4-206ENST00000587201 MCPH1Q8NEM0 835 aa19.65■□□□□ 0.74
TPM4-206ENST00000587201 RSPH1Q8WYR4 309 aa19.65■□□□□ 0.74
TPM4-206ENST00000587201 MRPS27Q92552 414 aaKnown RBP19.65■□□□□ 0.74
TPM4-206ENST00000587201 RAB34Q9BZG1 259 aa19.65■□□□□ 0.74
TPM4-206ENST00000587201 GPRC5CQ9NQ84 441 aa19.65■□□□□ 0.74
TPM4-206ENST00000587201 INPP5FQ9Y2H2 1132 aa19.65■□□□□ 0.74
TPM4-206ENST00000587201 PCDHGC5Q9Y5F6 944 aa19.65■□□□□ 0.74
TPM4-206ENST00000587201 ARHGEF35A5YM69 484 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 MEIS3P2A8K0S8 358 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 MUTP22033 750 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 AXLP30530 894 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 NRIP1P48552 1158 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 ERVFC1P60507 584 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 KRT17Q04695 432 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 PDIA5Q14554 519 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 CTC1Q2NKJ3 1217 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 PUS10Q3MIT2 529 aaKnown RBP19.64■□□□□ 0.73
TPM4-206ENST00000587201 RILPL1Q5EBL4 403 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 NOMO2Q5JPE7 1267 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 IFNLR1Q8IU57 520 aaPredicted RBP19.64■□□□□ 0.73
TPM4-206ENST00000587201 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.64■□□□□ 0.73
TPM4-206ENST00000587201 SPG21Q9NZD8 308 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 LZTS1Q9Y250 596 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 STK24Q9Y6E0 443 aa19.64■□□□□ 0.73
TPM4-206ENST00000587201 LRRIQ4A6NIV6 560 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 LAD1O00515 517 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 LINC01565O15544 149 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 TSPAN1O60635 241 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 OFD1O75665 1012 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 IL9P15248 144 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 LTBRP36941 435 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 ALDH7A1P49419 539 aaKnown RBP19.63■□□□□ 0.73
TPM4-206ENST00000587201 MBTD1Q05BQ5 628 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 UBXN11Q5T124 520 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 PDE12Q6L8Q7 609 aaKnown RBP19.63■□□□□ 0.73
TPM4-206ENST00000587201 PADI6Q6TGC4 694 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 MRPL10Q7Z7H8 261 aaKnown RBP19.63■□□□□ 0.73
TPM4-206ENST00000587201 SNX29Q8TEQ0 813 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 CPB2Q96IY4 423 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 NFKBIZQ9BYH8 718 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 TLE6Q9H808 572 aa19.63■□□□□ 0.73
TPM4-206ENST00000587201 GRXCR2A6NFK2 248 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 NT5C1B-RDH14C9J2C7 533 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms