RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 SRGAP2CP0DJJ0 459 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 SKIP12755 728 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 PPM1AP35813 382 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 PBX3P40426 434 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 RARRES1P49788 294 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 MXD4Q14582 209 aaPredicted RBP14.69□□□□□ -0.06
H3F3B-205ENST00000587171 RABEP1Q15276 862 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 NOSTRINQ8IVI9 506 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 EFHBQ8N7U6 833 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 FAM184AQ8NB25 1140 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 RNF149Q8NC42 400 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 MRPS27Q92552 414 aaKnown RBP14.69□□□□□ -0.06
H3F3B-205ENST00000587171 MRPL9Q9BYD2 267 aaKnown RBP14.69□□□□□ -0.06
H3F3B-205ENST00000587171 FAM50BQ9Y247 325 aa14.69□□□□□ -0.06
H3F3B-205ENST00000587171 SPATA31C1P0DKV0 1188 aa14.68□□□□□ -0.06
H3F3B-205ENST00000587171 XRCC6P12956 609 aaKnown RBP eCLIP14.68□□□□□ -0.062e-12■□□□□ 10.2
H3F3B-205ENST00000587171 HOXA11P31270 313 aaPredicted RBP14.68□□□□□ -0.06
H3F3B-205ENST00000587171 NRIP1P48552 1158 aa14.68□□□□□ -0.06
H3F3B-205ENST00000587171 TRAPPC10P48553 1259 aa14.68□□□□□ -0.06
H3F3B-205ENST00000587171 ERVFC1P60507 584 aa14.68□□□□□ -0.06
H3F3B-205ENST00000587171 PDE12Q6L8Q7 609 aaKnown RBP14.68□□□□□ -0.06
H3F3B-205ENST00000587171 IFNLR1Q8IU57 520 aaPredicted RBP14.68□□□□□ -0.06
H3F3B-205ENST00000587171 MICAL1Q8TDZ2 1067 aa14.68□□□□□ -0.06
H3F3B-205ENST00000587171 PIGOQ8TEQ8 1089 aa14.68□□□□□ -0.06
H3F3B-205ENST00000587171 LPPQ93052 612 aa14.68□□□□□ -0.06
H3F3B-205ENST00000587171 MSLNLQ96KJ4 702 aa14.68□□□□□ -0.06
H3F3B-205ENST00000587171 MEIS3P2A8K0S8 358 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 MBTPS2O43462 519 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 GLP2RO95838 553 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 OR52Z1P0C646 297 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 U2AF2P26368 475 aaKnown RBP eCLIP14.67□□□□□ -0.06
H3F3B-205ENST00000587171 NDUFV1P49821 464 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 PTENP60484 403 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 POU5F1BQ06416 359 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 SMAD4Q13485 552 aaKnown RBP14.67□□□□□ -0.06
H3F3B-205ENST00000587171 PCBP1Q15365 356 aaKnown RBP eCLIP14.67□□□□□ -0.06
H3F3B-205ENST00000587171 ZNF174Q15697 407 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 SMAD2Q15796 467 aaKnown RBP14.67□□□□□ -0.06
H3F3B-205ENST00000587171 TTC38Q5R3I4 469 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 GLB1LQ6UWU2 654 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 RBM23Q86U06 439 aaKnown RBP14.67□□□□□ -0.06
H3F3B-205ENST00000587171 CATSPER3Q86XQ3 398 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 GJD3Q8N144 294 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 SLC39A11Q8N1S5 342 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 KHSRPQ92945 711 aaKnown RBP eCLIP14.67□□□□□ -0.06
H3F3B-205ENST00000587171 CCDC43Q96MW1 224 aaKnown RBP14.67□□□□□ -0.06
H3F3B-205ENST00000587171 TLE6Q9H808 572 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 TUFT1Q9NNX1 390 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 SPG21Q9NZD8 308 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 CLEC1BQ9P126 229 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 PRKAG3Q9UGI9 489 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 PUF60Q9UHX1 559 aaKnown RBP14.67□□□□□ -0.06
H3F3B-205ENST00000587171 CD207Q9UJ71 328 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 PCDHB2Q9Y5E7 798 aa14.67□□□□□ -0.06
H3F3B-205ENST00000587171 TDRD15B5MCY1 1934 aaKnown RBP14.66□□□□□ -0.06
H3F3B-205ENST00000587171 FSD2A1L4K1 749 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 ST18O60284 1047 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 MED24O75448 989 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 EYA4O95677 639 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 ARL2P36404 184 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 TECP42680 631 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 KRT17Q04695 432 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 ZP2Q05996 745 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 GNL2Q13823 731 aaKnown RBP14.66□□□□□ -0.06
H3F3B-205ENST00000587171 CAPSQ13938 189 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 TFDP1Q14186 410 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 CLUL1Q15846 466 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 LONRF3Q496Y0 759 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 NOMO2Q5JPE7 1267 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 UBXN11Q5T124 520 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 AGMOQ6ZNB7 445 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 MRPL10Q7Z7H8 261 aaKnown RBP14.66□□□□□ -0.06
H3F3B-205ENST00000587171 ASAP3Q8TDY4 903 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 PGBD4Q96DM1 585 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 CDCA3Q99618 268 aaPredicted RBP14.66□□□□□ -0.06
H3F3B-205ENST00000587171 POLR3CQ9BUI4 534 aaPredicted RBP14.66□□□□□ -0.06
H3F3B-205ENST00000587171 C1QTNF1Q9BXJ1 281 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 NFKBIZQ9BYH8 718 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 TBC1D13Q9NVG8 400 aa14.66□□□□□ -0.06
H3F3B-205ENST00000587171 A0A087WWV3 80 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 CARNS1A5YM72 827 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 PER2O15055 1255 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 TSPAN1O60635 241 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 USO1O60763 962 aaKnown RBP14.65□□□□□ -0.06
H3F3B-205ENST00000587171 OFD1O75665 1012 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 ERLIN2O94905 339 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 GLRA2P23416 452 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 RPA1P27694 616 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 AXLP30530 894 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 ALDH7A1P49419 539 aaKnown RBP14.65□□□□□ -0.06
H3F3B-205ENST00000587171 BCAR1P56945 870 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 COASYQ13057 564 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 DUSP6Q16828 381 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 PLPP4Q5VZY2 271 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 ADHFE1Q8IWW8 467 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 C4orf32Q8N8J7 132 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 SMRP1Q8NCR6 262 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 NACC1Q96RE7 527 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 TCF25Q9BQ70 676 aa14.65□□□□□ -0.06
H3F3B-205ENST00000587171 EPHX3Q9H6B9 360 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms