RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 SKIP12755 728 aa21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 SSTR3P32745 418 aaPredicted RBP21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 ERVFC1P60507 584 aa21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 COL19A1Q14993 1142 aa21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 CTC1Q2NKJ3 1217 aa21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 TTC38Q5R3I4 469 aa21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 NOSTRINQ8IVI9 506 aa21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 MRPL9Q9BYD2 267 aaKnown RBP21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 XPNPEP1Q9NQW7 623 aa21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 AGPAT5Q9NUQ2 364 aa21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 NOL7Q9UMY1 257 aaKnown RBP21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 FAM50BQ9Y247 325 aa21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 FNDC1Q4ZHG4 1894 aaPredicted RBP21.21■□□□□ 0.99
CLPTM1-206ENST00000586975 DGAT1O75907 488 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 RARRES1P49788 294 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 KRT17Q04695 432 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 ADAM15Q13444 863 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 NBR1Q14596 966 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 PLPP4Q5VZY2 271 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 GLB1LQ6UWU2 654 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 MAEAQ7L5Y9 396 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 MRPS27Q92552 414 aaKnown RBP21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 ENTPD7Q9NQZ7 604 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 SPG21Q9NZD8 308 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 PCDHB2Q9Y5E7 798 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 BDP1A6H8Y1 2624 aa21.2■□□□□ 0.98
CLPTM1-206ENST00000586975 MEIS3P2A8K0S8 358 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 NT5C1B-RDH14C9J2C7 533 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 USO1O60763 962 aaKnown RBP21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 TBX10O75333 385 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 ERLIN2O94905 339 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 RAB27AP51159 221 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 TFDP1Q14186 410 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 MXD4Q14582 209 aaPredicted RBP21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 FAM178BQ8IXR5 827 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 ERMNQ8TAM6 284 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 ASAP3Q8TDY4 903 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 PGBD4Q96DM1 585 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 TCF25Q9BQ70 676 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 TRAIPQ9BWF2 469 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 CD320Q9NPF0 282 aa21.19■□□□□ 0.98
CLPTM1-206ENST00000586975 INO80B-WBP1J3KQ70 363 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 ZC3H11AO75152 810 aaKnown RBP eCLIP21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 MED24O75448 989 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 SPATA31C1P0DKV0 1188 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 CA8P35219 290 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 PPM1AP35813 382 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 ALDH7A1P49419 539 aaKnown RBP21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 PLCB3Q01970 1234 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 RNASELQ05823 741 aaKnown RBP21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 TMC7Q7Z402 723 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 CATSPER3Q86XQ3 398 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 GJD3Q8N144 294 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 EFHBQ8N7U6 833 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 GBP3Q9H0R5 595 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 TUFT1Q9NNX1 390 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 CD207Q9UJ71 328 aa21.18■□□□□ 0.98
CLPTM1-206ENST00000586975 BCAR1P56945 870 aa21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 PTENP60484 403 aa21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 NCBP1Q09161 790 aaKnown RBP21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 ORC2Q13416 577 aaPredicted RBP21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 NOMO2Q5JPE7 1267 aa21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 MCTP1Q6DN14 999 aa21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 POTEGQ6S5H5 508 aa21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 POLR3FQ9H1D9 316 aaPredicted RBP21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 EPHX3Q9H6B9 360 aa21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 BARX2Q9UMQ3 279 aaPredicted RBP21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 LZTS1Q9Y250 596 aa21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 KIF3AQ9Y496 699 aa21.17■□□□□ 0.98
CLPTM1-206ENST00000586975 ZNF623O75123 536 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 OFD1O75665 1012 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 XRCC6P12956 609 aaKnown RBP eCLIP21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 HOXA11P31270 313 aaPredicted RBP21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 ARL2P36404 184 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 TRAPPC10P48553 1259 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 CAPSQ13938 189 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 PDE12Q6L8Q7 609 aaKnown RBP21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 SLC39A11Q8N1S5 342 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 URGCPQ8TCY9 931 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 CPB2Q96IY4 423 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 TMX3Q96JJ7 454 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 NACC1Q96RE7 527 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 POLR3CQ9BUI4 534 aaPredicted RBP21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 GPRC5CQ9NQ84 441 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 TBC1D13Q9NVG8 400 aa21.16■□□□□ 0.98
CLPTM1-206ENST00000586975 PLXNA4Q9HCM2 1894 aa21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 FSCN2O14926 492 aa21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 MBTPS2O43462 519 aa21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 GLRA2P23416 452 aa21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 RBM10P98175 930 aaKnown RBP21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 UBXN11Q5T124 520 aa21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 KHSRPQ92945 711 aaKnown RBP eCLIP21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 TMEM169Q96HH4 297 aa21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 CLEC1BQ9P126 229 aa21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 ATG2AQ2TAZ0 1938 aa21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 NCOR1O75376 2440 aa21.15■□□□□ 0.98
CLPTM1-206ENST00000586975 ARHGEF35A5YM69 484 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 LRRIQ4A6NIV6 560 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 HIDE1A8MVS5 230 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 TSPAN1O60635 241 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms