RNA–Protein interactions for RNA: ENST00000586568.1

CXXC1-206, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-206ENST00000586568 CACNA1HO95180 2353 aa16.49■□□□□ 0.23
CXXC1-206ENST00000586568 MEIS3P2A8K0S8 358 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 SLC37A4O43826 429 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 ZC3H11AO75152 810 aaKnown RBP eCLIP16.48■□□□□ 0.23
CXXC1-206ENST00000586568 QARSP47897 775 aaKnown RBP16.48■□□□□ 0.23
CXXC1-206ENST00000586568 RAB27AP51159 221 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 PPP2R5CQ13362 524 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 INF2Q27J81 1249 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 CATSPER4Q7RTX7 472 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 KRT25Q7Z3Z0 450 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 ZNF579Q8NAF0 562 aaKnown RBP16.48■□□□□ 0.23
CXXC1-206ENST00000586568 KREMEN2Q8NCW0 462 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 SLC22A17Q8WUG5 538 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 FAM20AQ96MK3 541 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 POMKQ9H5K3 350 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 KCNMB3Q9NPA1 279 aa16.48■□□□□ 0.23
CXXC1-206ENST00000586568 C2CD4DB7Z1M9 353 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 CTSAP10619 480 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 SP100P23497 879 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-206ENST00000586568 MTHFRP42898 656 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 VCPP55072 806 aaKnown RBP16.47■□□□□ 0.23
CXXC1-206ENST00000586568 NPEPPSP55786 919 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 GIT2Q14161 759 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 PLA2G4FQ68DD2 849 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 PPP4R3AQ6IN85 833 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 CPLX2Q6PUV4 134 aaKnown RBP16.47■□□□□ 0.23
CXXC1-206ENST00000586568 MRPL10Q7Z7H8 261 aaKnown RBP16.47■□□□□ 0.23
CXXC1-206ENST00000586568 ZBTB33Q86T24 672 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 C12orf76Q8N812 135 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-206ENST00000586568 BCL7CQ8WUZ0 217 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-206ENST00000586568 PRPF31Q8WWY3 499 aaKnown RBP16.47■□□□□ 0.23
CXXC1-206ENST00000586568 AUTS2Q8WXX7 1259 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 RIPOR3Q96MK2 946 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 NLRP4Q96MN2 994 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 TSHZ2Q9NRE2 1034 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 VAV3Q9UKW4 847 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 KCNJ14Q9UNX9 436 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
CXXC1-206ENST00000586568 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.46■□□□□ 0.23
CXXC1-206ENST00000586568 P4HBP07237 508 aaKnown RBP16.46■□□□□ 0.23
CXXC1-206ENST00000586568 WEE2P0C1S8 567 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 HOXA11P31270 313 aaPredicted RBP16.46■□□□□ 0.23
CXXC1-206ENST00000586568 RNASELQ05823 741 aaKnown RBP16.46■□□□□ 0.23
CXXC1-206ENST00000586568 STK3Q13188 491 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 LETM2Q2VYF4 491 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 ATAT1Q5SQI0 421 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 KANK3Q6NY19 840 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 AGMOQ6ZNB7 445 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 ZNF280BQ86YH2 543 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 EXOC8Q8IYI6 725 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 UBALD2Q8IYN6 164 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 TMEM87AQ8NBN3 555 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 SLC7A3Q8WY07 619 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 PGBD4Q96DM1 585 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 PHF20Q9BVI0 1012 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 VN1R3Q9BXE9 311 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 DHX33Q9H6R0 707 aaKnown RBP16.46■□□□□ 0.23
CXXC1-206ENST00000586568 AGPAT5Q9NUQ2 364 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 DZANK1Q9NVP4 752 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 WRAP73Q9P2S5 460 aaPredicted RBP16.46■□□□□ 0.23
CXXC1-206ENST00000586568 DNAJB4Q9UDY4 337 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 SORCS3Q9UPU3 1222 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 INPP5FQ9Y2H2 1132 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 PPME1Q9Y570 386 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 COL4A3BPQ9Y5P4 624 aa16.46■□□□□ 0.23
CXXC1-206ENST00000586568 FNDC1Q4ZHG4 1894 aaPredicted RBP16.46■□□□□ 0.22
CXXC1-206ENST00000586568 KIAA1671Q9BY89 1806 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 B4GALT3O60512 393 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 DKC1O60832 514 aaKnown RBP eCLIP16.45■□□□□ 0.22
CXXC1-206ENST00000586568 BRD1O95696 1058 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 PDGFBP01127 241 aaPredicted RBP16.45■□□□□ 0.22
CXXC1-206ENST00000586568 GCFC2P16383 781 aaKnown RBP16.45■□□□□ 0.22
CXXC1-206ENST00000586568 EPCAMP16422 314 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 CA8P35219 290 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 SLC11A1P49279 550 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 AFF1P51825 1210 aaKnown RBP16.45■□□□□ 0.22
CXXC1-206ENST00000586568 RARS2Q5T160 578 aaKnown RBP16.45■□□□□ 0.22
CXXC1-206ENST00000586568 SRGAP1Q7Z6B7 1085 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 ZDHHC14Q8IZN3 488 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 HAS1Q92839 578 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 CEP170P1Q96L14 293 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 SLKQ9H2G2 1235 aaPredicted RBP16.45■□□□□ 0.22
CXXC1-206ENST00000586568 MINDY3Q9H8M7 445 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 PLXNA4Q9HCM2 1894 aa16.45■□□□□ 0.22
CXXC1-206ENST00000586568 CCDC194A0A1B0GVG4 234 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 TBX3O15119 743 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 LILRB3O75022 631 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 DDHD2O94830 711 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 ALDH2P05091 517 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 RFC5P40937 340 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 NUBP1P53384 320 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 LAMTOR4Q0VGL1 99 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 MTMR3Q13615 1198 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 EPHA7Q15375 998 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 PTPN14Q15678 1187 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 UBXN11Q5T124 520 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 KIAA1841Q6NSI8 718 aa16.44■□□□□ 0.22
CXXC1-206ENST00000586568 NEK8Q86SG6 692 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms