RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 OTOP2Q7RTS6 562 aa21.16■□□□□ 0.98
DDX39A-204ENST00000586558 DYMQ7RTS9 669 aa21.16■□□□□ 0.98
DDX39A-204ENST00000586558 CATSPER4Q7RTX7 472 aa21.16■□□□□ 0.98
DDX39A-204ENST00000586558 TDHQ8IZJ6 230 aa21.16■□□□□ 0.98
DDX39A-204ENST00000586558 DNAJC19Q96DA6 116 aa21.16■□□□□ 0.98
DDX39A-204ENST00000586558 TRIM9Q9C026 710 aa21.16■□□□□ 0.98
DDX39A-204ENST00000586558 POLD4Q9HCU8 107 aa21.16■□□□□ 0.98
DDX39A-204ENST00000586558 SEL1LQ9UBV2 794 aa21.16■□□□□ 0.98
DDX39A-204ENST00000586558 CCDC169A6NNP5 214 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 INO80B-WBP1J3KQ70 363 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 ZNF202O95125 648 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 MYL1P05976 194 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 CACNB1Q02641 598 aaPredicted RBP21.15■□□□□ 0.98
DDX39A-204ENST00000586558 MBTD1Q05BQ5 628 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 SHHQ15465 462 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 C9orf50Q5SZB4 431 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 FMR1NBQ8N0W7 255 aaPredicted RBP21.15■□□□□ 0.98
DDX39A-204ENST00000586558 SLC17A8Q8NDX2 589 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 RNPC3Q96LT9 517 aaKnown RBP21.15■□□□□ 0.98
DDX39A-204ENST00000586558 C7orf25Q9BPX7 421 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 MINDY3Q9H8M7 445 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 KMT5AQ9NQR1 393 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 CHST12Q9NRB3 414 aa21.15■□□□□ 0.98
DDX39A-204ENST00000586558 SFI1A8K8P3 1242 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 CSDE1O75534 798 aaKnown RBP21.14■□□□□ 0.97
DDX39A-204ENST00000586558 ERLIN2O94905 339 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 ABCD1P33897 745 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 NCBP1Q09161 790 aaKnown RBP21.14■□□□□ 0.97
DDX39A-204ENST00000586558 MAPK6Q16659 721 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 FAM187BQ17R55 369 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 TCTN1Q2MV58 587 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 KANK3Q6NY19 840 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 KRBA2Q6ZNG9 492 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 MYCT1Q8N699 235 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 CNNM3Q8NE01 707 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 ENGASEQ8NFI3 743 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 KCNN1Q92952 543 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 PRIMPOLQ96LW4 560 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 TSPYL2Q9H2G4 693 aaPredicted RBP21.14■□□□□ 0.97
DDX39A-204ENST00000586558 ZHX3Q9H4I2 956 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 PRMT7Q9NVM4 692 aaPredicted RBP21.14■□□□□ 0.97
DDX39A-204ENST00000586558 ARHGAP28Q9P2N2 729 aa21.14■□□□□ 0.97
DDX39A-204ENST00000586558 ADGRA3Q8IWK6 1321 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 FRMD3A2A2Y4 597 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 ZBBXA8MT70 800 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 GOLGA6L22H0YM25 854 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 GADD45BO75293 160 aaPredicted RBP21.13■□□□□ 0.97
DDX39A-204ENST00000586558 PRPF40AO75400 957 aaKnown RBP21.13■□□□□ 0.97
DDX39A-204ENST00000586558 FGFR4P22455 802 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 AXLP30530 894 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 KCNJ6P48051 423 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 PPP4R3CPQ6ZMV5 832 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 CCDC65Q8IXS2 484 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 STAMQ92783 540 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 PAGE5Q96GU1 130 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 CCDC113Q9H0I3 377 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 TMX1Q9H3N1 280 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 FZD8Q9H461 694 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 AGPAT5Q9NUQ2 364 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 SLC4A7Q9Y6M7 1214 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 TET1Q8NFU7 2136 aa21.13■□□□□ 0.97
DDX39A-204ENST00000586558 DENND3A2RUS2 1198 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 TRAK2O60296 914 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 MAPTP10636 758 aaKnown RBP21.12■□□□□ 0.97
DDX39A-204ENST00000586558 IDEP14735 1019 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 ZSCAN20P17040 1043 aaPredicted RBP21.12■□□□□ 0.97
DDX39A-204ENST00000586558 AFMP43652 599 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 NCKAP1LP55160 1127 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 WDR5P61964 334 aaKnown RBP21.12■□□□□ 0.97
DDX39A-204ENST00000586558 ASIC1P78348 528 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 SNW1Q13573 536 aaKnown RBP21.12■□□□□ 0.97
DDX39A-204ENST00000586558 DSC3Q14574 896 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 AMHR2Q16671 573 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 TMEM161BQ8NDZ6 487 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 CCDC51Q96ER9 411 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 TIGD1Q96MW7 591 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 KIFC3Q9BVG8 833 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 TMEM134Q9H6X4 195 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 OLFML3Q9NRN5 406 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 C1orf112Q9NSG2 853 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 PANK4Q9NVE7 773 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 RNF216Q9NWF9 866 aaPredicted RBP21.12■□□□□ 0.97
DDX39A-204ENST00000586558 DACT1Q9NYF0 836 aa21.12■□□□□ 0.97
DDX39A-204ENST00000586558 PIN4Q9Y237 131 aaKnown RBP21.12■□□□□ 0.97
DDX39A-204ENST00000586558 K7ERI5 159 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 SLC16A4O15374 487 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 TSPAN1O60635 241 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 AMHP03971 560 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 PRKCBP05771 671 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 SFR1Q86XK3 245 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 FAM178BQ8IXR5 827 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 PHOSPHO2Q8TCD6 241 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 SLC9A7Q96T83 725 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 ADAM2Q99965 735 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 TRAIPQ9BWF2 469 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 RGS18Q9NS28 235 aa21.11■□□□□ 0.97
DDX39A-204ENST00000586558 CXXC1Q9P0U4 656 aaPredicted RBP21.11■□□□□ 0.97
DDX39A-204ENST00000586558 COLQQ9Y215 455 aaPredicted RBP21.11■□□□□ 0.97
DDX39A-204ENST00000586558 CNTNAP2Q9UHC6 1331 aa21.1■□□□□ 0.97
DDX39A-204ENST00000586558 PVALEFA0A1B0GWK0 134 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms