RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 FOXD4L4Q8WXT5 416 aaPredicted RBP24.02■■□□□ 1.44
R3HDM4-202ENST00000586080 POLD4Q9HCU8 107 aa24.02■■□□□ 1.44
R3HDM4-202ENST00000586080 FAM105AQ9NUU6 356 aa24.02■■□□□ 1.44
R3HDM4-202ENST00000586080 RNF19AQ9NV58 838 aa24.02■■□□□ 1.44
R3HDM4-202ENST00000586080 HCSTQ9UBK5 93 aa24.02■■□□□ 1.44
R3HDM4-202ENST00000586080 TSPAN1O60635 241 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 EOMESO95936 686 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 RB1P06400 928 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 SKIP12755 728 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 ATF7P17544 494 aaPredicted RBP24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 RAB27AP51159 221 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 POU5F1BQ06416 359 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 KCNK18Q7Z418 384 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 IFNLR1Q8IU57 520 aaPredicted RBP24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 ZBTB8OSQ8IWT0 167 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 RASSF8Q8NHQ8 419 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 HELQQ8TDG4 1101 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 LPPQ93052 612 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 CPB2Q96IY4 423 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 AK8Q96MA6 479 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 NT5C3AQ9H0P0 336 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 ZSCAN16Q9H4T2 348 aaPredicted RBP24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 PRDM6Q9NQX0 595 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 LMCD1Q9NZU5 365 aa24.01■■□□□ 1.43
R3HDM4-202ENST00000586080 C5orf67F2Z3F1 127 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 MARCKSP29966 332 aaPredicted RBP24■■□□□ 1.43
R3HDM4-202ENST00000586080 UBA7P41226 1012 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 GRIN1Q05586 938 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 CLLU1OSQ5K130 101 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 ZNF598Q86UK7 904 aaKnown RBP24■■□□□ 1.43
R3HDM4-202ENST00000586080 LRRC43Q8N309 656 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 DEPTORQ8TB45 409 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 BSNDQ8WZ55 320 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 IFT74Q96LB3 600 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 CASD1Q96PB1 797 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 PNMA5Q96PV4 448 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 PLVAPQ9BX97 442 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 NFKBIZQ9BYH8 718 aa24■■□□□ 1.43
R3HDM4-202ENST00000586080 TYW1Q9NV66 732 aaKnown RBP24■■□□□ 1.43
R3HDM4-202ENST00000586080 LIG1P18858 919 aa23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 HOXA11P31270 313 aaPredicted RBP23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 PCBP1Q15365 356 aaKnown RBP eCLIP23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 HYIQ5T013 277 aa23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 NOTUMQ6P988 496 aa23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 KIFAP3Q92845 792 aa23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 MRPL38Q96DV4 380 aaKnown RBP23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 CALML4Q96GE6 196 aa23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 RUSC1Q9BVN2 902 aa23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 TRAIPQ9BWF2 469 aa23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 AAASQ9NRG9 546 aa23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 PCDHB2Q9Y5E7 798 aa23.99■■□□□ 1.43
R3HDM4-202ENST00000586080 GRM6O15303 877 aa23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 AXLP30530 894 aa23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 LONP1P36776 959 aaKnown RBP23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 NAMPTP43490 491 aa23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 PPP2R5AQ15172 486 aa23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 TMEM132AQ24JP5 1023 aa23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 PGBD4Q96DM1 585 aa23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 C2orf40Q9H1Z8 148 aa23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 ALG13Q9NP73 1137 aaKnown RBP23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 INPP5FQ9Y2H2 1132 aa23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 PCDHB12Q9Y5F1 795 aa23.98■■□□□ 1.43
R3HDM4-202ENST00000586080 B4GALT5O43286 388 aa23.97■■□□□ 1.43
R3HDM4-202ENST00000586080 PTPAQ15257 358 aa23.97■■□□□ 1.43
R3HDM4-202ENST00000586080 AMHR2Q16671 573 aa23.97■■□□□ 1.43
R3HDM4-202ENST00000586080 TMEM119Q4V9L6 283 aa23.97■■□□□ 1.43
R3HDM4-202ENST00000586080 CDCA2Q69YH5 1023 aaPredicted RBP23.97■■□□□ 1.43
R3HDM4-202ENST00000586080 GLB1LQ6UWU2 654 aa23.97■■□□□ 1.43
R3HDM4-202ENST00000586080 KLHL23Q8NBE8 558 aa23.97■■□□□ 1.43
R3HDM4-202ENST00000586080 CCDC51Q96ER9 411 aa23.97■■□□□ 1.43
R3HDM4-202ENST00000586080 USP28Q96RU2 1077 aa23.97■■□□□ 1.43
R3HDM4-202ENST00000586080 KIFC3Q9BVG8 833 aa23.97■■□□□ 1.43
R3HDM4-202ENST00000586080 PRRC2BQ5JSZ5 2229 aaKnown RBP23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 MEIS3P2A8K0S8 358 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 HIP1RO75146 1068 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 PLA2G4BP0C869 781 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 ARF4P18085 180 aaPredicted RBP23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 LAG3P18627 525 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 RAD51AP2Q09MP3 1159 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 TIGD5Q53EQ6 642 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 UBXN11Q5T124 520 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 RINT1Q6NUQ1 792 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 THNSL1Q8IYQ7 743 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 COLGALT1Q8NBJ5 622 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 P2RX5Q93086 422 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 EIF2AQ9BY44 585 aaKnown RBP23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 MRPL9Q9BYD2 267 aaKnown RBP23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 TRIM6Q9C030 488 aaPredicted RBP23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 CWH43Q9H720 699 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 PRMT7Q9NVM4 692 aaPredicted RBP23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 THEGQ9P2T0 379 aa23.96■■□□□ 1.43
R3HDM4-202ENST00000586080 ZNF623O75123 536 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 ITGB1P05556 798 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 PRKCBP05771 671 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 KARSQ15046 597 aaKnown RBP23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 MAPK6Q16659 721 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 NAALADL2Q58DX5 795 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 SPECC1Q5M775 1068 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 LRRC55Q6ZSA7 311 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 CDR2LQ86X02 465 aaPredicted RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms