RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 ARSHQ5FYA8 562 aa18.5■□□□□ 0.55
GFAP-205ENST00000585543 C9orf50Q5SZB4 431 aa18.5■□□□□ 0.55
GFAP-205ENST00000585543 IFNLR1Q8IU57 520 aaPredicted RBP18.5■□□□□ 0.55
GFAP-205ENST00000585543 CCDC65Q8IXS2 484 aa18.5■□□□□ 0.55
GFAP-205ENST00000585543 MYCT1Q8N699 235 aa18.5■□□□□ 0.55
GFAP-205ENST00000585543 LRRC15Q8TF66 581 aa18.5■□□□□ 0.55
GFAP-205ENST00000585543 SLC9A7Q96T83 725 aa18.5■□□□□ 0.55
GFAP-205ENST00000585543 C1orf112Q9NSG2 853 aa18.5■□□□□ 0.55
GFAP-205ENST00000585543 PRMT7Q9NVM4 692 aaPredicted RBP18.5■□□□□ 0.55
GFAP-205ENST00000585543 COLQQ9Y215 455 aaPredicted RBP18.5■□□□□ 0.55
GFAP-205ENST00000585543 HPSEQ9Y251 543 aa18.5■□□□□ 0.55
GFAP-205ENST00000585543 FAM237AA0A1B0GTK4 181 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 LIG1P18858 919 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 AXLP30530 894 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 NDUFA8P51970 172 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 WDR5P61964 334 aaKnown RBP18.49■□□□□ 0.55
GFAP-205ENST00000585543 MAPK7Q13164 816 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 GIT2Q14161 759 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 CDCA2Q69YH5 1023 aaPredicted RBP18.49■□□□□ 0.55
GFAP-205ENST00000585543 KANK3Q6NY19 840 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 TMEM87AQ8NBN3 555 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 CNNM3Q8NE01 707 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 SPIRE2Q8WWL2 714 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 BSNDQ8WZ55 320 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 POLD4Q9HCU8 107 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 CHST12Q9NRB3 414 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 KBTBD4Q9NVX7 518 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 SEL1LQ9UBV2 794 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 SERTAD1Q9UHV2 236 aa18.49■□□□□ 0.55
GFAP-205ENST00000585543 HOOK1Q9UJC3 728 aaKnown RBP18.49■□□□□ 0.55
GFAP-205ENST00000585543 PIN4Q9Y237 131 aaKnown RBP18.49■□□□□ 0.55
GFAP-205ENST00000585543 MYMKA6NI61 221 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 SFI1A8K8P3 1242 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 FGFR4P22455 802 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 NPTX2P47972 431 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 ASIC1P78348 528 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 STRN3Q13033 797 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 FAM178BQ8IXR5 827 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 MYOCDQ8IZQ8 938 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 DAW1Q8N136 415 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 PHOSPHO2Q8TCD6 241 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 CCDC47Q96A33 483 aaKnown RBP18.48■□□□□ 0.55
GFAP-205ENST00000585543 OSBPL7Q9BZF2 842 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 LRFN2Q9ULH4 789 aa18.48■□□□□ 0.55
GFAP-205ENST00000585543 K7ENM7 598 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 K7ERI5 159 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 CSDE1O75534 798 aaKnown RBP18.47■□□□□ 0.55
GFAP-205ENST00000585543 PRKCBP05771 671 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 MYL1P05976 194 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 STAG3L1P0CL83 205 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 SKIP12755 728 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 ATP2A2P16615 1042 aaKnown RBP18.47■□□□□ 0.55
GFAP-205ENST00000585543 AFMP43652 599 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 UBE2HP62256 183 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 MBTD1Q05BQ5 628 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 FAM160A1Q05DH4 1040 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 TWF2Q6IBS0 349 aaKnown RBP18.47■□□□□ 0.55
GFAP-205ENST00000585543 APBB1IPQ7Z5R6 666 aaPredicted RBP18.47■□□□□ 0.55
GFAP-205ENST00000585543 STAMQ92783 540 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 VWCEQ96DN2 955 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 CCDC51Q96ER9 411 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 ADAM2Q99965 735 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 ZBED2Q9BTP6 218 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 TSPYL2Q9H2G4 693 aaPredicted RBP18.47■□□□□ 0.55
GFAP-205ENST00000585543 PRO3102Q9H379 93 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 AGPAT5Q9NUQ2 364 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 PANK4Q9NVE7 773 aa18.47■□□□□ 0.55
GFAP-205ENST00000585543 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.46■□□□□ 0.55
GFAP-205ENST00000585543 SLC16A4O15374 487 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 ACTN4O43707 911 aaKnown RBP18.46■□□□□ 0.55
GFAP-205ENST00000585543 TRAK2O60296 914 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 KINO60870 393 aaKnown RBP18.46■□□□□ 0.55
GFAP-205ENST00000585543 ZNF202O95125 648 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 RAB27AP51159 221 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 ZNF131P52739 623 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 PRPF4BQ13523 1007 aaKnown RBP18.46■□□□□ 0.55
GFAP-205ENST00000585543 HERC4Q5GLZ8 1057 aaPredicted RBP18.46■□□□□ 0.55
GFAP-205ENST00000585543 RASIP1Q5U651 963 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 NOTUMQ6P988 496 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 PPP4R3CPQ6ZMV5 832 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 STXBP4Q6ZWJ1 553 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 SLC24A5Q71RS6 500 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 C7orf25Q9BPX7 421 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 TRIM9Q9C026 710 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 GOLPH3LQ9H4A5 285 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 TMEM134Q9H6X4 195 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 MINDY3Q9H8M7 445 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 RGS18Q9NS28 235 aa18.46■□□□□ 0.55
GFAP-205ENST00000585543 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.45■□□□□ 0.54
GFAP-205ENST00000585543 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.45■□□□□ 0.54
GFAP-205ENST00000585543 ENPP3O14638 875 aa18.45■□□□□ 0.54
GFAP-205ENST00000585543 TSPAN1O60635 241 aa18.45■□□□□ 0.54
GFAP-205ENST00000585543 PRPF40AO75400 957 aaKnown RBP18.45■□□□□ 0.54
GFAP-205ENST00000585543 IBSPP21815 317 aaPredicted RBP18.45■□□□□ 0.54
GFAP-205ENST00000585543 FAM187BQ17R55 369 aa18.45■□□□□ 0.54
GFAP-205ENST00000585543 LONRF3Q496Y0 759 aa18.45■□□□□ 0.54
GFAP-205ENST00000585543 KRBA2Q6ZNG9 492 aa18.45■□□□□ 0.54
GFAP-205ENST00000585543 CLEC17AQ6ZS10 378 aa18.45■□□□□ 0.54
GFAP-205ENST00000585543 HACE1Q8IYU2 909 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms