RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 C12orf76Q8N812 135 aaPredicted RBP16.26■□□□□ 0.19
SDF2-202ENST00000585428 LPPQ93052 612 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 TMEM169Q96HH4 297 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 IFT122Q9HBG6 1241 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 FAM105AQ9NUU6 356 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 TBC1D13Q9NVG8 400 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 SEPT9Q9UHD8 586 aaPredicted RBP16.26■□□□□ 0.19
SDF2-202ENST00000585428 ZC3H11AO75152 810 aaKnown RBP eCLIP16.25■□□□□ 0.19
SDF2-202ENST00000585428 WEE2P0C1S8 567 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 SFPQP23246 707 aaKnown RBP eCLIP16.25■□□□□ 0.19
SDF2-202ENST00000585428 PSMC5P62195 406 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 SSRP1Q08945 709 aaKnown RBP16.25■□□□□ 0.19
SDF2-202ENST00000585428 MTMR3Q13615 1198 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 LONRF3Q496Y0 759 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 ATAT1Q5SQI0 421 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 TWF2Q6IBS0 349 aaKnown RBP16.25■□□□□ 0.19
SDF2-202ENST00000585428 RUFY3Q7L099 469 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 MRPL10Q7Z7H8 261 aaKnown RBP16.25■□□□□ 0.19
SDF2-202ENST00000585428 ZBTB33Q86T24 672 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 RHPN2Q8IUC4 686 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 KSR1Q8IVT5 923 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 FAM177A1Q8N128 213 aaPredicted RBP16.25■□□□□ 0.19
SDF2-202ENST00000585428 DAGLBQ8NCG7 672 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 BCL7CQ8WUZ0 217 aaPredicted RBP16.25■□□□□ 0.19
SDF2-202ENST00000585428 AUTS2Q8WXX7 1259 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 ZNF274Q96GC6 653 aaPredicted RBP16.25■□□□□ 0.19
SDF2-202ENST00000585428 ZSWIM6Q9HCJ5 1215 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 USTQ9Y2C2 406 aa16.25■□□□□ 0.19
SDF2-202ENST00000585428 EML1O00423 815 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 LILRB3O75022 631 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 EPCAMP16422 314 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 RARS2Q5T160 578 aaKnown RBP16.24■□□□□ 0.19
SDF2-202ENST00000585428 GALNT17Q6IS24 598 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 KIAA1841Q6NSI8 718 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 GLB1LQ6UWU2 654 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 ZNF280BQ86YH2 543 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 TRIM22Q8IYM9 498 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 ZNF579Q8NAF0 562 aaKnown RBP16.24■□□□□ 0.19
SDF2-202ENST00000585428 VN1R3Q9BXE9 311 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 DZANK1Q9NVP4 752 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 DNAJB4Q9UDY4 337 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 LIMD1Q9UGP4 676 aa16.24■□□□□ 0.19
SDF2-202ENST00000585428 PIN4Q9Y237 131 aaKnown RBP16.24■□□□□ 0.19
SDF2-202ENST00000585428 MYH9P35579 1960 aaKnown RBP16.24■□□□□ 0.19
SDF2-202ENST00000585428 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.23■□□□□ 0.19
SDF2-202ENST00000585428 H0Y858 1186 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 GALR2O43603 387 aaPredicted RBP16.23■□□□□ 0.19
SDF2-202ENST00000585428 DEXIO95424 95 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 HOXA11P31270 313 aaPredicted RBP16.23■□□□□ 0.19
SDF2-202ENST00000585428 SLC11A1P49279 550 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 RAB27AP51159 221 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 AFF1P51825 1210 aaKnown RBP16.23■□□□□ 0.19
SDF2-202ENST00000585428 PPP2R5CQ13362 524 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 AGMOQ6ZNB7 445 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 FEZF2Q8TBJ5 459 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 ATOH1Q92858 354 aaPredicted RBP16.23■□□□□ 0.19
SDF2-202ENST00000585428 PGBD4Q96DM1 585 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 JPH2Q9BR39 696 aaPredicted RBP16.23■□□□□ 0.19
SDF2-202ENST00000585428 SMOC2Q9H3U7 446 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 CYP26B1Q9NR63 512 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 FAM86C1Q9NVL1 165 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 PCDHB2Q9Y5E7 798 aa16.23■□□□□ 0.19
SDF2-202ENST00000585428 PROB1E7EW31 1015 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 B4GALT3O60512 393 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 DDHD2O94830 711 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 ALDH2P05091 517 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 QARSP47897 775 aaKnown RBP16.22■□□□□ 0.19
SDF2-202ENST00000585428 NPEPPSP55786 919 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 NONOQ15233 471 aaKnown RBP eCLIP16.22■□□□□ 0.19
SDF2-202ENST00000585428 CATSPER4Q7RTX7 472 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 PPFIBP1Q86W92 1011 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 TMEM87AQ8NBN3 555 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 PRPF31Q8WWY3 499 aaKnown RBP16.22■□□□□ 0.19
SDF2-202ENST00000585428 FAM20AQ96MK3 541 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 AIFM3Q96NN9 605 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 DHX33Q9H6R0 707 aaKnown RBP16.22■□□□□ 0.19
SDF2-202ENST00000585428 AGPAT5Q9NUQ2 364 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 STK39Q9UEW8 545 aa16.22■□□□□ 0.19
SDF2-202ENST00000585428 DDX25Q9UHL0 483 aaKnown RBP16.22■□□□□ 0.19
SDF2-202ENST00000585428 EPB41L2O43491 1005 aaKnown RBP16.21■□□□□ 0.19
SDF2-202ENST00000585428 SLC37A4O43826 429 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 REC8O95072 547 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 ASGR2P07307 311 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 CA8P35219 290 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 RNASELQ05823 741 aaKnown RBP16.21■□□□□ 0.19
SDF2-202ENST00000585428 PTPN14Q15678 1187 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 INF2Q27J81 1249 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 UBXN11Q5T124 520 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 PLA2G4FQ68DD2 849 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 PPP4R3AQ6IN85 833 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 SRGAP1Q7Z6B7 1085 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 GPR149Q86SP6 731 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 CABP7Q86V35 215 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 EXOC8Q8IYI6 725 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 TMEM105Q8N8V8 129 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 NLRP4Q96MN2 994 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 KLHL5Q96PQ7 755 aa16.21■□□□□ 0.19
SDF2-202ENST00000585428 LARP6Q9BRS8 491 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms