RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 F13A1P00488 732 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 SKIP12755 728 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 ATF7P17544 494 aaPredicted RBP18■□□□□ 0.47
ERBB2-222ENST00000584908 RAB27AP51159 221 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 BTG3Q14201 252 aaPredicted RBP18■□□□□ 0.47
ERBB2-222ENST00000584908 EPC2Q52LR7 807 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 MAEAQ7L5Y9 396 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 TMEM192Q8IY95 271 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 SYT2Q8N9I0 419 aaPredicted RBP18■□□□□ 0.47
ERBB2-222ENST00000584908 BSNDQ8WZ55 320 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 TIPINQ9BVW5 301 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 RNF19AQ9NV58 838 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 KCND2Q9NZV8 630 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 TSPAN1O60635 241 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 RB1P06400 928 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 GUCY2CP25092 1073 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 MARCKSP29966 332 aaPredicted RBP17.99■□□□□ 0.47
ERBB2-222ENST00000584908 NAMPTP43490 491 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 SLC12A3P55017 1021 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 PKP1Q13835 747 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 PPP2R5AQ15172 486 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 FAM187BQ17R55 369 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 TWF2Q6IBS0 349 aaKnown RBP17.99■□□□□ 0.47
ERBB2-222ENST00000584908 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 DAW1Q8N136 415 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 LINC00301Q8NCQ3 95 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 RSPH1Q8WYR4 309 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 CCDC51Q96ER9 411 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 CALML4Q96GE6 196 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 CDK5RAP3Q96JB5 506 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 ZNF396Q96N95 335 aaPredicted RBP17.99■□□□□ 0.47
ERBB2-222ENST00000584908 RUSC1Q9BVN2 902 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 CSRNP2Q9H175 543 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 FAM105AQ9NUU6 356 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 LMCD1Q9NZU5 365 aa17.99■□□□□ 0.47
ERBB2-222ENST00000584908 LRRIQ4A6NIV6 560 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 INO80B-WBP1J3KQ70 363 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 RFXAPO00287 272 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 ERLIN2O94905 339 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 YEATS4O95619 227 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 BMPR1AP36894 532 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 GATMP50440 423 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 CEBPZQ03701 1054 aaKnown RBP17.98■□□□□ 0.47
ERBB2-222ENST00000584908 MAPK7Q13164 816 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 ATL3Q6DD88 541 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 SPRYD3Q8NCJ5 442 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 FBXO22Q8NEZ5 403 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 MAFAQ8NHW3 353 aaPredicted RBP17.98■□□□□ 0.47
ERBB2-222ENST00000584908 LRRC15Q8TF66 581 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 PRIMPOLQ96LW4 560 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 CASD1Q96PB1 797 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 PLVAPQ9BX97 442 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 TMEM117Q9H0C3 514 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 C2orf40Q9H1Z8 148 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 FZD8Q9H461 694 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 C17orf75Q9HAS0 396 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 BLOC1S4Q9NUP1 217 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 MTUS1Q9ULD2 1270 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 MTCH2Q9Y6C9 303 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 MRPL42Q9Y6G3 142 aaKnown RBP17.98■□□□□ 0.47
ERBB2-222ENST00000584908 H3BNC9 293 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 PLA2G4BP0C869 781 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 FGFR1P11362 822 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 KARSQ15046 597 aaKnown RBP17.98■□□□□ 0.47
ERBB2-222ENST00000584908 ZRSR1Q15695 479 aaKnown RBP17.98■□□□□ 0.47
ERBB2-222ENST00000584908 UBXN11Q5T124 520 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 NOTUMQ6P988 496 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 USP49Q70CQ1 688 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 MRPL10Q7Z7H8 261 aaKnown RBP17.98■□□□□ 0.47
ERBB2-222ENST00000584908 ZBTB8OSQ8IWT0 167 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 KRI1Q8N9T8 703 aaKnown RBP17.98■□□□□ 0.47
ERBB2-222ENST00000584908 EPSTI1Q96J88 318 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 IFT74Q96LB3 600 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 DRC1Q96MC2 740 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 CCDC113Q9H0I3 377 aa17.98■□□□□ 0.47
ERBB2-222ENST00000584908 PRMT7Q9NVM4 692 aaPredicted RBP17.98■□□□□ 0.47
ERBB2-222ENST00000584908 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
ERBB2-222ENST00000584908 ATG2AQ2TAZ0 1938 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 TBKBP1A7MCY6 615 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 HIP1RO75146 1068 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 PPP6R2O75170 966 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 BRD1O95696 1058 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 ARF4P18085 180 aaPredicted RBP17.97■□□□□ 0.47
ERBB2-222ENST00000584908 PLCG1P19174 1290 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 EFNA5P52803 228 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 NCBP1Q09161 790 aaKnown RBP17.97■□□□□ 0.47
ERBB2-222ENST00000584908 BECN1Q14457 450 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 NAALADL2Q58DX5 795 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 CLLU1OSQ5K130 101 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 GDPD5Q8WTR4 605 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 SYMPKQ92797 1274 aaKnown RBP17.97■□□□□ 0.47
ERBB2-222ENST00000584908 P2RX5Q93086 422 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 CLIC6Q96NY7 704 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 PLIN2Q99541 437 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 PCDHB2Q9Y5E7 798 aa17.97■□□□□ 0.47
ERBB2-222ENST00000584908 A0A1B0GUA9 196 aa17.96■□□□□ 0.46
ERBB2-222ENST00000584908 SPTLC2O15270 562 aa17.96■□□□□ 0.46
ERBB2-222ENST00000584908 IGFBP4P22692 258 aa17.96■□□□□ 0.46
ERBB2-222ENST00000584908 CTNNB1P35222 781 aa17.96■□□□□ 0.46
ERBB2-222ENST00000584908 STK38Q15208 465 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms