RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 GOLGA5Q8TBA6 731 aa12.21□□□□□ -0.45
TOP3A-217ENST00000584582 FAM71BQ8TC56 605 aa12.21□□□□□ -0.45
TOP3A-217ENST00000584582 PPP1R13LQ8WUF5 828 aa12.21□□□□□ -0.45
TOP3A-217ENST00000584582 TMEM206Q9H813 350 aa12.21□□□□□ -0.45
TOP3A-217ENST00000584582 ASTN1O14525 1302 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 TTI1O43156 1089 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 RAD51CO43502 376 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 ATF7P17544 494 aaPredicted RBP12.21□□□□□ -0.46
TOP3A-217ENST00000584582 PSMC5P62195 406 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 DHX9Q08211 1270 aaKnown RBP12.21□□□□□ -0.46
TOP3A-217ENST00000584582 AHDC1Q5TGY3 1603 aaPredicted RBP12.21□□□□□ -0.46
TOP3A-217ENST00000584582 SYCE1Q8N0S2 351 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 UBL4BQ8N7F7 174 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 POLR3CQ9BUI4 534 aaPredicted RBP12.21□□□□□ -0.46
TOP3A-217ENST00000584582 TAS2R14Q9NYV8 317 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 NOC2LQ9Y3T9 749 aaKnown RBP12.21□□□□□ -0.46
TOP3A-217ENST00000584582 PCDHA10Q9Y5I2 948 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 SART1O43290 800 aaKnown RBP12.21□□□□□ -0.46
TOP3A-217ENST00000584582 NOL4O94818 638 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 KIF4AO95239 1232 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 NEFHP12036 1026 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 KCNJ1P48048 391 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 TRPC3Q13507 836 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 PAPD7Q5XG87 772 aaKnown RBP12.21□□□□□ -0.46
TOP3A-217ENST00000584582 ZNF280CQ8ND82 737 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 NSUN6Q8TEA1 469 aaKnown RBP12.21□□□□□ -0.46
TOP3A-217ENST00000584582 HAUS1Q96CS2 278 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 ADAM33Q9BZ11 813 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 KLHL11Q9NVR0 708 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 APEX2Q9UBZ4 518 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 PCDHB4Q9Y5E5 795 aa12.21□□□□□ -0.46
TOP3A-217ENST00000584582 KLRG2A4D1S0 409 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-217ENST00000584582 OPLAHO14841 1288 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 WDR46O15213 610 aaKnown RBP12.2□□□□□ -0.46
TOP3A-217ENST00000584582 TGFB1I1O43294 461 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 PSMD10O75832 226 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 CNGA1P29973 690 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 CNTN2Q02246 1040 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 NAB2Q15742 525 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 SNRNP35Q16560 246 aaKnown RBP12.2□□□□□ -0.46
TOP3A-217ENST00000584582 UGCGQ16739 394 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 AADACL2Q6P093 401 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 INTS8Q75QN2 995 aaKnown RBP12.2□□□□□ -0.46
TOP3A-217ENST00000584582 CREG2Q8IUH2 290 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 KIFAP3Q92845 792 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 LENG9Q96B70 501 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 TTYH3Q9C0H2 523 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 GRID2IPA4D2P6 1211 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 GOLGA8SH3BPF8 625 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 VIL1P09327 827 aaKnown RBP12.2□□□□□ -0.46
TOP3A-217ENST00000584582 RARRES1P49788 294 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 EPHB4P54760 987 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 NNTQ13423 1086 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 HP1BP3Q5SSJ5 553 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-217ENST00000584582 DCUN1D2Q6PH85 259 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 CPA5Q8WXQ8 436 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 HSD17B14Q9BPX1 270 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 POLR3FQ9H1D9 316 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-217ENST00000584582 ELP3Q9H9T3 547 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 TBC1D22BQ9NU19 505 aa12.2□□□□□ -0.46
TOP3A-217ENST00000584582 FIGNQ5HY92 759 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 C1orf186Q6ZWK4 172 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 MICALL1Q8N3F8 863 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 LRRC71Q8N4P6 559 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 DCPSQ96C86 337 aaKnown RBP12.19□□□□□ -0.46
TOP3A-217ENST00000584582 PDCD2LQ9BRP1 358 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 C11orf70Q9BRQ4 267 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 KCNK9Q9NPC2 374 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 SHANK3Q9BYB0 1731 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 SGPL1O95470 568 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 PGK2P07205 417 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 FAM153BP0C7A2 387 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 AMPD2Q01433 879 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 CALCOCO2Q13137 446 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 FAM153CQ494X1 144 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 SPOPLQ6IQ16 392 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 TMEM270Q6UE05 265 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 RBM46Q8TBY0 533 aaKnown RBP12.19□□□□□ -0.46
TOP3A-217ENST00000584582 FAM153AQ9UHL3 310 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 AJAP1Q9UKB5 411 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-217ENST00000584582 MYH8P13535 1937 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 CASZ1Q86V15 1759 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 MYH10P35580 1976 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 E7EVH7 732 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 RBAK-RBAKDNI3L0D1 243 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 EBAG9O00559 213 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 MYZAPP0CAP1 466 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 IFNAR2P48551 515 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 MFAP3P55082 362 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 ITGB3BPQ13352 177 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-217ENST00000584582 MOB2Q70IA6 237 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 RNF10Q8N5U6 811 aaKnown RBP12.19□□□□□ -0.46
TOP3A-217ENST00000584582 CAPS2Q9BXY5 557 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 JPH1Q9HDC5 661 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-217ENST00000584582 ANAPC7Q9UJX3 599 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 MTUS1Q9ULD2 1270 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 PLCH1Q4KWH8 1693 aa12.19□□□□□ -0.46
TOP3A-217ENST00000584582 DDX3XO00571 662 aaKnown RBP eCLIP12.18□□□□□ -0.462e-11■■■□□ 16.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms