RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 NGRNQ9NPE2 291 aaKnown RBP17.55■□□□□ 0.4
SKA2-209ENST00000583976 BMP2KQ9NSY1 1161 aaPredicted RBP17.55■□□□□ 0.4
SKA2-209ENST00000583976 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 PUF60Q9UHX1 559 aaKnown RBP17.55■□□□□ 0.4
SKA2-209ENST00000583976 PIN4Q9Y237 131 aaKnown RBP17.55■□□□□ 0.4
SKA2-209ENST00000583976 IGKV6-21A0A0C4DH24 114 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 FSD2A1L4K1 749 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 C2orf71A6NGG8 1288 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 EML1O00423 815 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 PDGFBP01127 241 aaPredicted RBP17.54■□□□□ 0.4
SKA2-209ENST00000583976 GJB2P29033 226 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 PHKA2P46019 1235 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 BCAR1P56945 870 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 SMC1AQ14683 1233 aaKnown RBP17.54■□□□□ 0.4
SKA2-209ENST00000583976 PTPN21Q16825 1174 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 INF2Q27J81 1249 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 TWF2Q6IBS0 349 aaKnown RBP17.54■□□□□ 0.4
SKA2-209ENST00000583976 BMP8AQ7Z5Y6 402 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 HSCBQ8IWL3 235 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 SNX21Q969T3 373 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 MBOAT7Q96N66 472 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 NIFKQ9BYG3 293 aaKnown RBP17.54■□□□□ 0.4
SKA2-209ENST00000583976 KCNH6Q9H252 994 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 VAV3Q9UKW4 847 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 INPP5FQ9Y2H2 1132 aa17.54■□□□□ 0.4
SKA2-209ENST00000583976 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.54■□□□□ 0.4
SKA2-209ENST00000583976 CLASP2O75122 1294 aaKnown RBP17.53■□□□□ 0.4
SKA2-209ENST00000583976 KRT17Q04695 432 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 SIGLEC14Q08ET2 396 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 CUL4AQ13619 759 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 XKR3Q5GH77 459 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 KANK3Q6NY19 840 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 ANO5Q75V66 913 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 RHPN2Q8IUC4 686 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 SUGP1Q8IWZ8 645 aaKnown RBP17.53■□□□□ 0.4
SKA2-209ENST00000583976 DAGLBQ8NCG7 672 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 RDM1Q8NG50 284 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 OXER1Q8TDS5 423 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 CASP10Q92851 521 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 C8orf76Q96K31 380 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 MRPL9Q9BYD2 267 aaKnown RBP17.53■□□□□ 0.4
SKA2-209ENST00000583976 GCOM2Q9BZD3 368 aaPredicted RBP17.53■□□□□ 0.4
SKA2-209ENST00000583976 ZBP1Q9H171 429 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 WRAP73Q9P2S5 460 aaPredicted RBP17.53■□□□□ 0.4
SKA2-209ENST00000583976 DDX25Q9UHL0 483 aaKnown RBP17.53■□□□□ 0.4
SKA2-209ENST00000583976 SMC3Q9UQE7 1217 aa17.53■□□□□ 0.4
SKA2-209ENST00000583976 CYP3A7-CYP3A51PA0A087WV96 503 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.52■□□□□ 0.4
SKA2-209ENST00000583976 C2CD4DB7Z1M9 353 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 SFPQP23246 707 aaKnown RBP eCLIP17.52■□□□□ 0.4
SKA2-209ENST00000583976 CYP3A7P24462 503 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 NPEPPSP55786 919 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 TCF15Q12870 199 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 GALNT17Q6IS24 598 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 FBXL6Q8N531 539 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 C12orf76Q8N812 135 aaPredicted RBP17.52■□□□□ 0.4
SKA2-209ENST00000583976 MRPL43Q8N983 215 aaKnown RBP17.52■□□□□ 0.4
SKA2-209ENST00000583976 ZNF579Q8NAF0 562 aaKnown RBP17.52■□□□□ 0.4
SKA2-209ENST00000583976 TMEM169Q96HH4 297 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 VN1R3Q9BXE9 311 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 FAM105AQ9NUU6 356 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 TBC1D13Q9NVG8 400 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 FAM86C1Q9NVL1 165 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 DACT1Q9NYF0 836 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 SUCLA2Q9P2R7 463 aaPredicted RBP17.52■□□□□ 0.4
SKA2-209ENST00000583976 DNAJB4Q9UDY4 337 aa17.52■□□□□ 0.4
SKA2-209ENST00000583976 CACNA1HO95180 2353 aa17.51■□□□□ 0.39
SKA2-209ENST00000583976 DDX11L8A8MPP1 907 aa17.51■□□□□ 0.39
SKA2-209ENST00000583976 EOMESO95936 686 aa17.51■□□□□ 0.39
SKA2-209ENST00000583976 EPCAMP16422 314 aa17.51■□□□□ 0.39
SKA2-209ENST00000583976 KRT2P35908 639 aa17.51■□□□□ 0.39
SKA2-209ENST00000583976 NONOQ15233 471 aaKnown RBP eCLIP17.51■□□□□ 0.39
SKA2-209ENST00000583976 LETM2Q2VYF4 491 aa17.51■□□□□ 0.39
SKA2-209ENST00000583976 RARS2Q5T160 578 aaKnown RBP17.51■□□□□ 0.39
SKA2-209ENST00000583976 FAM177A1Q8N128 213 aaPredicted RBP17.51■□□□□ 0.39
SKA2-209ENST00000583976 VPS52Q8N1B4 723 aa17.51■□□□□ 0.39
SKA2-209ENST00000583976 ZNF710Q8N1W2 664 aa17.51■□□□□ 0.39
SKA2-209ENST00000583976 GBP3Q9H0R5 595 aa17.51■□□□□ 0.39
SKA2-209ENST00000583976 NRDE2Q9H7Z3 1164 aa17.51■□□□□ 0.39
SKA2-209ENST00000583976 C2orf16Q68DN1 1984 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 MAFO75444 373 aaPredicted RBP17.5■□□□□ 0.39
SKA2-209ENST00000583976 HOXB8P17481 243 aaPredicted RBP17.5■□□□□ 0.39
SKA2-209ENST00000583976 SLC11A1P49279 550 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 AFF1P51825 1210 aaKnown RBP17.5■□□□□ 0.39
SKA2-209ENST00000583976 NR5A1Q13285 461 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 MOXD1Q6UVY6 613 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 CATSPER4Q7RTX7 472 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 ZBTB33Q86T24 672 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 ZNF410Q86VK4 478 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 DIS3L2Q8IYB7 885 aaKnown RBP17.5■□□□□ 0.39
SKA2-209ENST00000583976 IFT122Q9HBG6 1241 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 BRMS1Q9HCU9 246 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 AGPAT5Q9NUQ2 364 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 CFAP54Q96N23 3096 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 DMDP11532 3685 aa17.5■□□□□ 0.39
SKA2-209ENST00000583976 FAM205CA6NFA0 338 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 BTBD18B2RXH4 712 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 ASGR2P07307 311 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 ALDH7A1P49419 539 aaKnown RBP17.49■□□□□ 0.39
SKA2-209ENST00000583976 PSMC5P62195 406 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms