RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 COASYQ13057 564 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 LRRC8DQ7L1W4 858 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 ZNF410Q86VK4 478 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 FAM178BQ8IXR5 827 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 GCOM2Q9BZD3 368 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-216ENST00000583804 RBSNQ9H1K0 784 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 ADAMTS10Q9H324 1103 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 MRPL44Q9H9J2 332 aaKnown RBP12.08□□□□□ -0.48
TOP3A-216ENST00000583804 KCNG1Q9UIX4 513 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 FRMD3A2A2Y4 597 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 TRIM43BA6NCK2 446 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 PITPNM1O00562 1244 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 KIAA0355O15063 1070 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 SLC16A4O15374 487 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 CSDE1O75534 798 aaKnown RBP12.07□□□□□ -0.48
TOP3A-216ENST00000583804 NMT1P30419 496 aaKnown RBP12.07□□□□□ -0.48
TOP3A-216ENST00000583804 FAM26DQ5JW98 314 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 ZBTB8OSQ8IWT0 167 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 GLIS3Q8NEA6 775 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 SPIRE2Q8WWL2 714 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 TRIM43Q96BQ3 446 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-216ENST00000583804 SCLYQ96I15 445 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 SLC39A2Q9NP94 309 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 ANO10Q9NW15 660 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 SEL1LQ9UBV2 794 aa12.07□□□□□ -0.48
TOP3A-216ENST00000583804 INO80B-WBP1J3KQ70 363 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 K7ENM7 598 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 K7ERI5 159 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 GCNT3O95395 438 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 TIMP1P01033 207 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 IQCF3P0C7M6 154 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 DARSP14868 501 aaKnown RBP12.06□□□□□ -0.48
TOP3A-216ENST00000583804 CD44P16070 742 aaKnown RBP12.06□□□□□ -0.48
TOP3A-216ENST00000583804 EIF4BP23588 611 aaKnown RBP12.06□□□□□ -0.48
TOP3A-216ENST00000583804 SARSP49591 514 aaKnown RBP12.06□□□□□ -0.48
TOP3A-216ENST00000583804 STX17P56962 302 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 PTENP60484 403 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 MLLT1Q03111 559 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-216ENST00000583804 POU5F1BQ06416 359 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 RBL2Q08999 1139 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 MGAT3Q09327 533 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 MORC3Q14149 939 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 FAM26FQ5R3K3 315 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 NTPCRQ9BSD7 190 aaKnown RBP12.06□□□□□ -0.48
TOP3A-216ENST00000583804 INO80BQ9C086 356 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-216ENST00000583804 C2orf40Q9H1Z8 148 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 IFT122Q9HBG6 1241 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 RMND1Q9NWS8 449 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 CTNND2Q9UQB3 1225 aa12.06□□□□□ -0.48
TOP3A-216ENST00000583804 ADGRA3Q8IWK6 1321 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 DENND3A2RUS2 1198 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 H0YCG3 227 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 RPS6KA5O75582 802 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 GHRP10912 638 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 SYN1P17600 705 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 FGFR4P22455 802 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 NCKAP1LP55160 1127 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 TRAF7Q6Q0C0 670 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 DNAH12Q6ZR08 3092 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 ZNF720Q7Z2F6 126 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 HAUS6Q7Z4H7 955 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 SRGAP1Q7Z6B7 1085 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 LUZP1Q86V48 1076 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 AOPEPQ8N6M6 819 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 TMEM40Q8WWA1 233 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 GSDMAQ96QA5 445 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 WNT8AQ9H1J5 351 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 MINDY3Q9H8M7 445 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 PCDH10Q9P2E7 1040 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 ZMYND8Q9ULU4 1186 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-216ENST00000583804 NOC2LQ9Y3T9 749 aaKnown RBP12.05□□□□□ -0.48
TOP3A-216ENST00000583804 NR2E3Q9Y5X4 410 aa12.05□□□□□ -0.48
TOP3A-216ENST00000583804 RHOBTB3O94955 611 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 MYBP10242 640 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 MAPTP10636 758 aaKnown RBP12.04□□□□□ -0.48
TOP3A-216ENST00000583804 ITGB8P26012 769 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 CD52P31358 61 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 EFNA5P52803 228 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 MBTD1Q05BQ5 628 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 NFX1Q12986 1120 aaKnown RBP12.04□□□□□ -0.48
TOP3A-216ENST00000583804 STK4Q13043 487 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 PSMD2Q13200 908 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 LPIN1Q14693 890 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 MBTPS1Q14703 1052 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 KCNB1Q14721 858 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 MAPK6Q16659 721 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 TMEM132AQ24JP5 1023 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 ZC2HC1CQ53FD0 456 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-216ENST00000583804 FBXO47Q5MNV8 452 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 CDCA2Q69YH5 1023 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-216ENST00000583804 MFSD5Q6N075 450 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 STXBP4Q6ZWJ1 553 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 CATSPER4Q7RTX7 472 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 DEFB128Q7Z7B8 93 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 KIAA0895Q8NCT3 520 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 SLC17A8Q8NDX2 589 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 TMEM161BQ8NDZ6 487 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 SPATA20Q8TB22 786 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms