RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 RARS2Q5T160 578 aaKnown RBP22.98■■□□□ 1.27
SRSF1-206ENST00000583741 LRCH2Q5VUJ6 765 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 UBALD2Q8IYN6 164 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 VPS52Q8N1B4 723 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 BICD2Q8TD16 824 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 LPPQ93052 612 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 TMEM169Q96HH4 297 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 SH2D3AQ9BRG2 576 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.98■■□□□ 1.27
SRSF1-206ENST00000583741 WDR87Q6ZQQ6 2873 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 RIF1Q5UIP0 2472 aaKnown RBP22.98■■□□□ 1.27
SRSF1-206ENST00000583741 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.98■■□□□ 1.27
SRSF1-206ENST00000583741 CXCL14O95715 111 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 ASGR2P07307 311 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 SFNP31947 248 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 PHKA2P46019 1235 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 JAK3P52333 1124 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 LONRF3Q496Y0 759 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 MTERF2Q49AM1 385 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 BCL7CQ8WUZ0 217 aaPredicted RBP22.98■■□□□ 1.27
SRSF1-206ENST00000583741 TEKT3Q9BXF9 490 aa22.98■■□□□ 1.27
SRSF1-206ENST00000583741 SEPT9Q9UHD8 586 aaPredicted RBP22.98■■□□□ 1.27
SRSF1-206ENST00000583741 MEIS3P2A8K0S8 358 aa22.97■■□□□ 1.27
SRSF1-206ENST00000583741 STBD1O95210 358 aa22.97■■□□□ 1.27
SRSF1-206ENST00000583741 EPCAMP16422 314 aa22.97■■□□□ 1.27
SRSF1-206ENST00000583741 MTHFRP42898 656 aa22.97■■□□□ 1.27
SRSF1-206ENST00000583741 TMEM105Q8N8V8 129 aa22.97■■□□□ 1.27
SRSF1-206ENST00000583741 CCDC148Q8NFR7 591 aa22.97■■□□□ 1.27
SRSF1-206ENST00000583741 SNX27Q96L92 541 aa22.97■■□□□ 1.27
SRSF1-206ENST00000583741 SLC26A6Q9BXS9 759 aa22.97■■□□□ 1.27
SRSF1-206ENST00000583741 RNF26Q9BY78 433 aaPredicted RBP22.97■■□□□ 1.27
SRSF1-206ENST00000583741 GCOM2Q9BZD3 368 aaPredicted RBP22.97■■□□□ 1.27
SRSF1-206ENST00000583741 NCOA5Q9HCD5 579 aaKnown RBP22.97■■□□□ 1.27
SRSF1-206ENST00000583741 PTPRZ1P23471 2315 aaPredicted RBP22.96■■□□□ 1.27
SRSF1-206ENST00000583741 A0A087WZ62 844 aa22.96■■□□□ 1.27
SRSF1-206ENST00000583741 IGKV6-21A0A0C4DH24 114 aa22.96■■□□□ 1.27
SRSF1-206ENST00000583741 GALR2O43603 387 aaPredicted RBP22.96■■□□□ 1.27
SRSF1-206ENST00000583741 PSMD10O75832 226 aa22.96■■□□□ 1.27
SRSF1-206ENST00000583741 USP11P51784 963 aa22.96■■□□□ 1.27
SRSF1-206ENST00000583741 AKAP17AQ02040 695 aaKnown RBP22.96■■□□□ 1.27
SRSF1-206ENST00000583741 IGSF21Q96ID5 467 aa22.96■■□□□ 1.27
SRSF1-206ENST00000583741 FDXACB1Q9BRP7 624 aaPredicted RBP22.96■■□□□ 1.27
SRSF1-206ENST00000583741 TRAIPQ9BWF2 469 aa22.96■■□□□ 1.27
SRSF1-206ENST00000583741 NIFKQ9BYG3 293 aaKnown RBP22.96■■□□□ 1.27
SRSF1-206ENST00000583741 IRF2BPLQ9H1B7 796 aa22.96■■□□□ 1.27
SRSF1-206ENST00000583741 CHST12Q9NRB3 414 aa22.96■■□□□ 1.27
SRSF1-206ENST00000583741 TBC1D13Q9NVG8 400 aa22.96■■□□□ 1.27
SRSF1-206ENST00000583741 IRAK3Q9Y616 596 aa22.96■■□□□ 1.27
SRSF1-206ENST00000583741 B4GALT3O60512 393 aa22.95■■□□□ 1.26
SRSF1-206ENST00000583741 NUBP1P53384 320 aa22.95■■□□□ 1.26
SRSF1-206ENST00000583741 TWF2Q6IBS0 349 aaKnown RBP22.95■■□□□ 1.26
SRSF1-206ENST00000583741 KIAA1841Q6NSI8 718 aa22.95■■□□□ 1.26
SRSF1-206ENST00000583741 VN1R3Q9BXE9 311 aa22.95■■□□□ 1.26
SRSF1-206ENST00000583741 NRDE2Q9H7Z3 1164 aa22.95■■□□□ 1.26
SRSF1-206ENST00000583741 DZANK1Q9NVP4 752 aa22.95■■□□□ 1.26
SRSF1-206ENST00000583741 PIN4Q9Y237 131 aaKnown RBP22.95■■□□□ 1.26
SRSF1-206ENST00000583741 C2orf16Q68DN1 1984 aa22.95■■□□□ 1.26
SRSF1-206ENST00000583741 CTSAP10619 480 aa22.94■■□□□ 1.26
SRSF1-206ENST00000583741 SFPQP23246 707 aaKnown RBP eCLIP22.94■■□□□ 1.26
SRSF1-206ENST00000583741 XKR3Q5GH77 459 aa22.94■■□□□ 1.26
SRSF1-206ENST00000583741 B3GNT9Q6UX72 402 aa22.94■■□□□ 1.26
SRSF1-206ENST00000583741 MIER3Q7Z3K6 550 aa22.94■■□□□ 1.26
SRSF1-206ENST00000583741 DDX53Q86TM3 631 aaKnown RBP22.94■■□□□ 1.26
SRSF1-206ENST00000583741 TDRD5Q8NAT2 981 aaKnown RBP22.94■■□□□ 1.26
SRSF1-206ENST00000583741 TBCKQ8TEA7 893 aa22.94■■□□□ 1.26
SRSF1-206ENST00000583741 SLC22A17Q8WUG5 538 aa22.94■■□□□ 1.26
SRSF1-206ENST00000583741 DNAJB4Q9UDY4 337 aa22.94■■□□□ 1.26
SRSF1-206ENST00000583741 LIMD1Q9UGP4 676 aa22.94■■□□□ 1.26
SRSF1-206ENST00000583741 SMC3Q9UQE7 1217 aa22.94■■□□□ 1.26
SRSF1-206ENST00000583741 INPP5FQ9Y2H2 1132 aa22.94■■□□□ 1.26
SRSF1-206ENST00000583741 DCHS1Q96JQ0 3298 aa22.93■■□□□ 1.26
SRSF1-206ENST00000583741 FAM186AA6NE01 2351 aa22.93■■□□□ 1.26
SRSF1-206ENST00000583741 CPLX1O14810 134 aa22.93■■□□□ 1.26
SRSF1-206ENST00000583741 TDP2O95551 362 aa22.93■■□□□ 1.26
SRSF1-206ENST00000583741 GALTP07902 379 aa22.93■■□□□ 1.26
SRSF1-206ENST00000583741 IFNAR1P17181 557 aa22.93■■□□□ 1.26
SRSF1-206ENST00000583741 BMS1Q14692 1282 aaKnown RBP22.93■■□□□ 1.26
SRSF1-206ENST00000583741 KSR1Q8IVT5 923 aa22.93■■□□□ 1.26
SRSF1-206ENST00000583741 ZDHHC14Q8IZN3 488 aa22.93■■□□□ 1.26
SRSF1-206ENST00000583741 RDM1Q8NG50 284 aa22.93■■□□□ 1.26
SRSF1-206ENST00000583741 LLPHQ9BRT6 129 aaKnown RBP22.93■■□□□ 1.26
SRSF1-206ENST00000583741 FAM105AQ9NUU6 356 aa22.93■■□□□ 1.26
SRSF1-206ENST00000583741 DBR1Q9UK59 544 aaKnown RBP22.93■■□□□ 1.26
SRSF1-206ENST00000583741 POLGP54098 1239 aaPredicted RBP22.92■■□□□ 1.26
SRSF1-206ENST00000583741 CDC42EP1Q00587 391 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 Q4G0T1 1027 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 NOMO2Q5JPE7 1267 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 ATAT1Q5SQI0 421 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 GLB1LQ6UWU2 654 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 TMC5Q6UXY8 1006 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 RHPN2Q8IUC4 686 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 SUCLA2Q9P2R7 463 aaPredicted RBP22.92■■□□□ 1.26
SRSF1-206ENST00000583741 PROB1E7EW31 1015 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 OFD1O75665 1012 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 NLRP5P59047 1200 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 PTPN14Q15678 1187 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 CPLX2Q6PUV4 134 aaKnown RBP22.92■■□□□ 1.26
SRSF1-206ENST00000583741 ZNF410Q86VK4 478 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 TMEM87AQ8NBN3 555 aa22.92■■□□□ 1.26
SRSF1-206ENST00000583741 RSPH1Q8WYR4 309 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms