RNA–Protein interactions for RNA: ENST00000583517.1

NLK-204, Transcript of nemo like kinase, humanhuman

TSL 3

Gene NLK, Length 695 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-204ENST00000583517 CARNS1A5YM72 827 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 MEIS3P2A8K0S8 358 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 ZC3H11AO75152 810 aaKnown RBP eCLIP13.31□□□□□ -0.28
NLK-204ENST00000583517 SKIP12755 728 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 QARSP47897 775 aaKnown RBP13.31□□□□□ -0.28
NLK-204ENST00000583517 RAB27AP51159 221 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 ITIH3Q06033 890 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 STK3Q13188 491 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 LETM2Q2VYF4 491 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 PLA2G4FQ68DD2 849 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 PPP4R3AQ6IN85 833 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
NLK-204ENST00000583517 GLB1LQ6UWU2 654 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 SUGP1Q8IWZ8 645 aaKnown RBP13.31□□□□□ -0.28
NLK-204ENST00000583517 VPS52Q8N1B4 723 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 IGSF21Q96ID5 467 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 FAM20AQ96MK3 541 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 NECTIN4Q96NY8 510 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 PRRX2Q99811 253 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 FAM105AQ9NUU6 356 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 TBC1D13Q9NVG8 400 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 NR2E1Q9Y466 385 aa13.31□□□□□ -0.28
NLK-204ENST00000583517 KMT2EQ8IZD2 1858 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 OFD1O75665 1012 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 CXCL14O95715 111 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 GALTP07902 379 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 CTSAP10619 480 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 POLGP54098 1239 aaPredicted RBP13.3□□□□□ -0.28
NLK-204ENST00000583517 PTPN5P54829 565 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 NPEPPSP55786 919 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
NLK-204ENST00000583517 LONRF3Q496Y0 759 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 NOMO2Q5JPE7 1267 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 CES5AQ6NT32 575 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 CATSPER4Q7RTX7 472 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 DDX53Q86TM3 631 aaKnown RBP13.3□□□□□ -0.28
NLK-204ENST00000583517 BCL7CQ8WUZ0 217 aaPredicted RBP13.3□□□□□ -0.28
NLK-204ENST00000583517 SLC7A3Q8WY07 619 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 NLRP4Q96MN2 994 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 POMKQ9H5K3 350 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 DHX33Q9H6R0 707 aaKnown RBP13.3□□□□□ -0.28
NLK-204ENST00000583517 NRDE2Q9H7Z3 1164 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 WRAP73Q9P2S5 460 aaPredicted RBP13.3□□□□□ -0.28
NLK-204ENST00000583517 KCNJ14Q9UNX9 436 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 COL4A3BPQ9Y5P4 624 aa13.3□□□□□ -0.28
NLK-204ENST00000583517 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.29□□□□□ -0.28
NLK-204ENST00000583517 CCDC194A0A1B0GVG4 234 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 C2CD4DB7Z1M9 353 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 B4GALT3O60512 393 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 DKC1O60832 514 aaKnown RBP eCLIP13.29□□□□□ -0.28
NLK-204ENST00000583517 P4HBP07237 508 aaKnown RBP13.29□□□□□ -0.28
NLK-204ENST00000583517 GCFC2P16383 781 aaKnown RBP13.29□□□□□ -0.28
NLK-204ENST00000583517 SP100P23497 879 aaPredicted RBP13.29□□□□□ -0.28
NLK-204ENST00000583517 SCRN1Q12765 414 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 TCF15Q12870 199 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 GIT2Q14161 759 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 AGMOQ6ZNB7 445 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 NEK8Q86SG6 692 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
NLK-204ENST00000583517 AUTS2Q8WXX7 1259 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 HAS1Q92839 578 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 PHOX2BQ99453 314 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 VN1R3Q9BXE9 311 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 MINDY3Q9H8M7 445 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 TSHZ2Q9NRE2 1034 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 PDRG1Q9NUG6 133 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 DZANK1Q9NVP4 752 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 DNAJB4Q9UDY4 337 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 PCDHB2Q9Y5E7 798 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 STK36Q9NRP7 1315 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 CACNA1HO95180 2353 aa13.29□□□□□ -0.28
NLK-204ENST00000583517 TBX3O15119 743 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 CDKL5O76039 1030 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 EPCAMP16422 314 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 HOXA11P31270 313 aaPredicted RBP13.28□□□□□ -0.28
NLK-204ENST00000583517 CA8P35219 290 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 MTHFRP42898 656 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 VCPP55072 806 aaKnown RBP13.28□□□□□ -0.28
NLK-204ENST00000583517 RNASELQ05823 741 aaKnown RBP13.28□□□□□ -0.28
NLK-204ENST00000583517 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 MRPL10Q7Z7H8 261 aaKnown RBP13.28□□□□□ -0.28
NLK-204ENST00000583517 ZNF280BQ86YH2 543 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 C4orf19Q8IY42 314 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 EXOC8Q8IYI6 725 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 KREMEN2Q8NCW0 462 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 SLC22A17Q8WUG5 538 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 PRPF31Q8WWY3 499 aaKnown RBP13.28□□□□□ -0.28
NLK-204ENST00000583517 PSPC1Q8WXF1 523 aaKnown RBP13.28□□□□□ -0.28
NLK-204ENST00000583517 PGBD4Q96DM1 585 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 CEP170P1Q96L14 293 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 RIPOR3Q96MK2 946 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 LXNQ9BS40 222 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 INPP5FQ9Y2H2 1132 aa13.28□□□□□ -0.28
NLK-204ENST00000583517 ZFHX2Q9C0A1 2572 aaPredicted RBP13.28□□□□□ -0.28
NLK-204ENST00000583517 GAS2O43903 313 aaKnown RBP13.27□□□□□ -0.29
NLK-204ENST00000583517 CCNT1O60563 726 aaKnown RBP13.27□□□□□ -0.29
NLK-204ENST00000583517 WEE2P0C1S8 567 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms