RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 RDM1Q8NG50 284 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ERMNQ8TAM6 284 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 INPP4AQ96PE3 977 aaPredicted RBP9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 GPR20Q99678 358 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MXRA8Q9BRK3 442 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 NGRNQ9NPE2 291 aaKnown RBP9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ENTPD7Q9NQZ7 604 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TMEM260Q9NX78 707 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 LRFN2Q9ULH4 789 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PCDHA12Q9UN75 941 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 DUSP12Q9UNI6 340 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CDY2AQ9Y6F7 541 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 R4GN57 208 aa9.77□□□□□ -0.85
PDLIM1P3-201ENST00000582370 A0A1W2PQ27 194 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 A0A1W2PQ64 194 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 A0A1W2PQD8 194 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CUTAO60888 179 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MBD3O95983 291 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SFNP31947 248 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MCM7P33993 719 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TOB1P50616 345 aaPredicted RBP9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 FXR2P51116 673 aaKnown RBP eCLIP9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 UBE2HP62256 183 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MRPS6P82932 125 aaKnown RBP9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PLCB3Q01970 1234 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 DNM1Q05193 864 aaKnown RBP9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PTGDRQ13258 359 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 HAUS3Q68CZ6 603 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 KIAA1841Q6NSI8 718 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 RUFY4Q6ZNE9 571 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 RTN4RL1Q86UN2 441 aaPredicted RBP9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 COLGALT1Q8NBJ5 622 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MRPS27Q92552 414 aaKnown RBP9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TCF25Q9BQ70 676 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SDF4Q9BRK5 362 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ANP32EQ9BTT0 268 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 AGO3Q9H9G7 860 aaKnown RBP9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 LIMD1Q9UGP4 676 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PUF60Q9UHX1 559 aaKnown RBP9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CDH22Q9UJ99 828 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TUBE1Q9UJT0 475 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SRPRBQ9Y5M8 271 aaKnown RBP9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 HCFC2Q9Y5Z7 792 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 UBIAD1Q9Y5Z9 338 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 NFASCO94856 1347 aa9.76□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PKD1L2Q7Z442 2459 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MBLAC1A4D2B0 266 aaPredicted RBP9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 EOMESO95936 686 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 LAG3P18627 525 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ME1P48163 572 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SARSP49591 514 aaKnown RBP9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 GATMP50440 423 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 KRT76Q01546 638 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PAK2Q13177 524 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TDGQ13569 410 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PRR16Q569H4 304 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 IER5Q5VY09 327 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PLA2G4DQ86XP0 818 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SMAP1Q8IYB5 467 aaPredicted RBP9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 GPR161Q8N6U8 529 aaKnown RBP9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 IL31RAQ8NI17 732 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 LEO1Q8WVC0 666 aaPredicted RBP9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 DNAJB3Q8WWF6 145 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 BORCS6Q96GS4 357 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 MTMR9Q96QG7 549 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 USP28Q96RU2 1077 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ERVK-5Q9HDB9 667 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 KCNMB3Q9NPA1 279 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CYP26B1Q9NR63 512 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 FAM13BQ9NYF5 915 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 USP25Q9UHP3 1055 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 DBR1Q9UK59 544 aaKnown RBP9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 FBXL21Q9UKT6 434 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PADI3Q9ULW8 664 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PCDHB6Q9Y5E3 794 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 IGSF9BQ9UPX0 1349 aa9.75□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CACNA1IQ9P0X4 2223 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 IGLV3-22A0A075B6J6 115 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 HIDE1A8MVS5 230 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SPATA31C2B4DYI2 1134 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 M0QZ92 97 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 IPO5O00410 1097 aaKnown RBP9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ADRB1P08588 477 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PPM1AP35813 382 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 JAK3P52333 1124 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TBC1D8BQ0IIM8 1120 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PPFIA1Q13136 1202 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 PTPAQ15257 358 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ZNF174Q15697 407 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 UTP14CQ5TAP6 766 aaKnown RBP9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CYFIP1Q7L576 1253 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SIX5Q8N196 739 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 DCLK2Q8N568 766 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 SLC5A5Q92911 643 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ACSF2Q96CM8 615 aaPredicted RBP9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 ZNF577Q9BSK1 485 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 TEKT3Q9BXF9 490 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 NT5C3AQ9H0P0 336 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 CUEDC2Q9H467 287 aa9.74□□□□□ -0.85
PDLIM1P3-201ENST00000582370 KCNH7Q9NS40 1196 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms