RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 AGPAT5Q9NUQ2 364 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 TTC3P53804 2025 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 FAM237AA0A1B0GTK4 181 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 TSPAN1O60635 241 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 GJB5O95377 273 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 AMHP03971 560 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 SFPQP23246 707 aaKnown RBP eCLIP18.15■□□□□ 0.5
RNF43-206ENST00000582293 CMA1P23946 247 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 NPTX2P47972 431 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 ZNF131P52739 623 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 FAM189BP81408 668 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 ODR4Q5SWX8 454 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 TAS1R3Q7RTX0 852 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 CATSPER4Q7RTX7 472 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 DHX58Q96C10 678 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 DNAJC19Q96DA6 116 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 FZD8Q9H461 694 aa18.15■□□□□ 0.5
RNF43-206ENST00000582293 RC3H2Q9HBD1 1191 aaKnown RBP18.15■□□□□ 0.5
RNF43-206ENST00000582293 SZT2Q5T011 3432 aa18.14■□□□□ 0.5
RNF43-206ENST00000582293 A0A1B0GVL5 298 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 INO80B-WBP1J3KQ70 363 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 POLR2DO15514 142 aaKnown RBP18.14■□□□□ 0.49
RNF43-206ENST00000582293 B4GALT5O43286 388 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 PFKFB1P16118 471 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 PEX3P56589 373 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 HTRA4P83105 476 aaPredicted RBP18.14■□□□□ 0.49
RNF43-206ENST00000582293 UBXN11Q5T124 520 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 FAM117BQ6P1L5 589 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 STAMQ92783 540 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 DRC1Q96MC2 740 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 FIZ1Q96SL8 496 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 NTPCRQ9BSD7 190 aaKnown RBP18.14■□□□□ 0.49
RNF43-206ENST00000582293 GOLPH3LQ9H4A5 285 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 KBTBD4Q9NVX7 518 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 ARHGAP28Q9P2N2 729 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 KCNH3Q9ULD8 1083 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 ODF2LQ9ULJ1 636 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 USP20Q9Y2K6 914 aa18.14■□□□□ 0.49
RNF43-206ENST00000582293 CHD9Q3L8U1 2897 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 A0A1W2PQ27 194 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 A0A1W2PQ64 194 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 A0A1W2PQD8 194 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 DENND3A2RUS2 1198 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 LCHNA4D1U4 455 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 PLS3P13797 630 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 ATF7P17544 494 aaPredicted RBP18.13■□□□□ 0.49
RNF43-206ENST00000582293 DNAJB2P25686 324 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 SARSP49591 514 aaKnown RBP18.13■□□□□ 0.49
RNF43-206ENST00000582293 PPP2R5AQ15172 486 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 PPP4R3CPQ6ZMV5 832 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 FAM43BQ6ZT52 329 aaPredicted RBP18.13■□□□□ 0.49
RNF43-206ENST00000582293 DYMQ7RTS9 669 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 DDX12PQ92771 950 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 C17orf75Q9HAS0 396 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 CHST12Q9NRB3 414 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 RNF19AQ9NV58 838 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 FAM13BQ9NYF5 915 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 PIN4Q9Y237 131 aaKnown RBP18.13■□□□□ 0.49
RNF43-206ENST00000582293 PCDHA11Q9Y5I1 949 aa18.13■□□□□ 0.49
RNF43-206ENST00000582293 MYH11P35749 1972 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 ACTN4O43707 911 aaKnown RBP18.12■□□□□ 0.49
RNF43-206ENST00000582293 UPP2O95045 317 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 ARF4P18085 180 aaPredicted RBP18.12■□□□□ 0.49
RNF43-206ENST00000582293 NDUFA8P51970 172 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 FAM187BQ17R55 369 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 SLC24A5Q71RS6 500 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 SV2BQ7L1I2 683 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 SPRED2Q7Z698 418 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 ZNF598Q86UK7 904 aaKnown RBP18.12■□□□□ 0.49
RNF43-206ENST00000582293 IQUBQ8NA54 791 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 DEPTORQ8TB45 409 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 SPIRE2Q8WWL2 714 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 ZNF689Q96CS4 500 aaPredicted RBP18.12■□□□□ 0.49
RNF43-206ENST00000582293 CPB2Q96IY4 423 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 IFT74Q96LB3 600 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 TRAIPQ9BWF2 469 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 NKX2-4Q9H2Z4 354 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 C1orf112Q9NSG2 853 aa18.12■□□□□ 0.49
RNF43-206ENST00000582293 A0A0U1RQF3 1178 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 FRMD3A2A2Y4 597 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 CCDC169A6NNP5 214 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 SLC16A4O15374 487 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 DGKIO75912 1065 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 NCKAP1LP55160 1127 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 PCBP1Q15365 356 aaKnown RBP eCLIP18.11■□□□□ 0.49
RNF43-206ENST00000582293 LONRF3Q496Y0 759 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 CDR2LQ86X02 465 aaPredicted RBP18.11■□□□□ 0.49
RNF43-206ENST00000582293 ECHDC2Q86YB7 292 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 NPAS4Q8IUM7 802 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 ZBTB8OSQ8IWT0 167 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 TMEM161BQ8NDZ6 487 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 SP7Q8TDD2 431 aaPredicted RBP18.11■□□□□ 0.49
RNF43-206ENST00000582293 KCNN1Q92952 543 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 C2orf40Q9H1Z8 148 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 TNMDQ9H2S6 317 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 TTYH1Q9H313 450 aaPredicted RBP18.11■□□□□ 0.49
RNF43-206ENST00000582293 CUEDC2Q9H467 287 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 PRMT7Q9NVM4 692 aaPredicted RBP18.11■□□□□ 0.49
RNF43-206ENST00000582293 SERTAD1Q9UHV2 236 aa18.11■□□□□ 0.49
RNF43-206ENST00000582293 PHLPP2Q6ZVD8 1323 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms