RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 CXCL14O95715 111 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 QARSP47897 775 aaKnown RBP23.32■■□□□ 1.32
SNX11-207ENST00000580875 PPP2R5CQ13362 524 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 KSR1Q8IVT5 923 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 VPS52Q8N1B4 723 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 SLC7A3Q8WY07 619 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 FAM20AQ96MK3 541 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 PRRX2Q99811 253 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 ZBP1Q9H171 429 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 ADAM7Q9H2U9 754 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 PDRG1Q9NUG6 133 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 VAV3Q9UKW4 847 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 KCNJ14Q9UNX9 436 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 CCDC194A0A1B0GVG4 234 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 DKC1O60832 514 aaKnown RBP eCLIP23.31■■□□□ 1.32
SNX11-207ENST00000580875 ZNF623O75123 536 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 CDKL5O76039 1030 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 SP100P23497 879 aaPredicted RBP23.31■■□□□ 1.32
SNX11-207ENST00000580875 LONRF3Q496Y0 759 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 NOMO2Q5JPE7 1267 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 IER5LQ5T953 404 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 TMEM173Q86WV6 379 aaPredicted RBP23.31■■□□□ 1.32
SNX11-207ENST00000580875 EXOC8Q8IYI6 725 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 PRSS33Q8NF86 280 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 ASIC4Q96FT7 647 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 IGSF21Q96ID5 467 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 PHF20Q9BVI0 1012 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 SLKQ9H2G2 1235 aaPredicted RBP23.31■■□□□ 1.32
SNX11-207ENST00000580875 IFT122Q9HBG6 1241 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 KCNMB3Q9NPA1 279 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 TBC1D13Q9NVG8 400 aa23.31■■□□□ 1.32
SNX11-207ENST00000580875 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.3■■□□□ 1.32
SNX11-207ENST00000580875 P4HBP07237 508 aaKnown RBP23.3■■□□□ 1.32
SNX11-207ENST00000580875 GCFC2P16383 781 aaKnown RBP23.3■■□□□ 1.32
SNX11-207ENST00000580875 POLGP54098 1239 aaPredicted RBP23.3■■□□□ 1.32
SNX11-207ENST00000580875 RNASELQ05823 741 aaKnown RBP23.3■■□□□ 1.32
SNX11-207ENST00000580875 GIT2Q14161 759 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 PPP4R3AQ6IN85 833 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 NEK8Q86SG6 692 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 ZBTB33Q86T24 672 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 DDX53Q86TM3 631 aaKnown RBP23.3■■□□□ 1.32
SNX11-207ENST00000580875 TMEM87AQ8NBN3 555 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 PGBD4Q96DM1 585 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 NRDE2Q9H7Z3 1164 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 AGPAT5Q9NUQ2 364 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 CDH22Q9UJ99 828 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 INPP5FQ9Y2H2 1132 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 PPME1Q9Y570 386 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 COL4A3BPQ9Y5P4 624 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 IRAK3Q9Y616 596 aa23.3■■□□□ 1.32
SNX11-207ENST00000580875 MEIS3P2A8K0S8 358 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 OFD1O75665 1012 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 GALTP07902 379 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 CTSAP10619 480 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 XBP1P17861 261 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 PTPN5P54829 565 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 NPEPPSP55786 919 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 CEP170P1Q96L14 293 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 POMKQ9H5K3 350 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 DZANK1Q9NVP4 752 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 PCDHB2Q9Y5E7 798 aa23.29■■□□□ 1.32
SNX11-207ENST00000580875 SEC24BO95487 1268 aa23.28■■□□□ 1.32
SNX11-207ENST00000580875 MTHFRP42898 656 aa23.28■■□□□ 1.32
SNX11-207ENST00000580875 SCRN1Q12765 414 aa23.28■■□□□ 1.32
SNX11-207ENST00000580875 PSPC1Q8WXF1 523 aaKnown RBP23.28■■□□□ 1.32
SNX11-207ENST00000580875 AUTS2Q8WXX7 1259 aa23.28■■□□□ 1.32
SNX11-207ENST00000580875 RIPOR3Q96MK2 946 aa23.28■■□□□ 1.32
SNX11-207ENST00000580875 DHX33Q9H6R0 707 aaKnown RBP23.28■■□□□ 1.32
SNX11-207ENST00000580875 STK36Q9NRP7 1315 aa23.28■■□□□ 1.32
SNX11-207ENST00000580875 TBX3O15119 743 aa23.27■■□□□ 1.32
SNX11-207ENST00000580875 CCNT1O60563 726 aaKnown RBP23.27■■□□□ 1.32
SNX11-207ENST00000580875 RFC5P40937 340 aa23.27■■□□□ 1.32
SNX11-207ENST00000580875 ZNF579Q8NAF0 562 aaKnown RBP23.27■■□□□ 1.32
SNX11-207ENST00000580875 URGCPQ8TCY9 931 aa23.27■■□□□ 1.32
SNX11-207ENST00000580875 BCL7CQ8WUZ0 217 aaPredicted RBP23.27■■□□□ 1.32
SNX11-207ENST00000580875 PRPF31Q8WWY3 499 aaKnown RBP23.27■■□□□ 1.32
SNX11-207ENST00000580875 NAP1L4Q99733 375 aaKnown RBP23.27■■□□□ 1.32
SNX11-207ENST00000580875 WRAP73Q9P2S5 460 aaPredicted RBP23.27■■□□□ 1.32
SNX11-207ENST00000580875 C2CD4DB7Z1M9 353 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 SRGAP2CP0DJJ0 459 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 MTMR3Q13615 1198 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 RARS2Q5T160 578 aaKnown RBP23.26■■□□□ 1.31
SNX11-207ENST00000580875 PIK3AP1Q6ZUJ8 805 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 SRGAP1Q7Z6B7 1085 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 C4orf19Q8IY42 314 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 KREMEN2Q8NCW0 462 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 HAS1Q92839 578 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 TMEM143Q96AN5 459 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 LXNQ9BS40 222 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 GBP3Q9H0R5 595 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 DNAJB4Q9UDY4 337 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 STK39Q9UEW8 545 aa23.26■■□□□ 1.31
SNX11-207ENST00000580875 GAS2O43903 313 aaKnown RBP23.25■■□□□ 1.31
SNX11-207ENST00000580875 MARCH6O60337 910 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 EPCAMP16422 314 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 YWHABP31946 246 aaKnown RBP23.25■■□□□ 1.31
SNX11-207ENST00000580875 SLC11A1P49279 550 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 LAMTOR4Q0VGL1 99 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 EPHA7Q15375 998 aa23.25■■□□□ 1.31
SNX11-207ENST00000580875 AGMOQ6ZNB7 445 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms