RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 NAALADL2Q58DX5 795 aa8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 MFSD14BQ5SR56 506 aa8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 FAM109BQ6ICB4 259 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 TSPYL6Q8N831 410 aa8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 KCNN1Q92952 543 aa8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 FAM84BQ96KN1 310 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 MPHOSPH8Q99549 860 aa8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 ZNF552Q9H707 407 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 LRP2BPQ9P2M1 347 aa8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 ZNF112Q9UJU3 913 aa8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 ACSL6Q9UKU0 697 aa8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 FRMPD3Q5JV73 1810 aa8.05□□□□□ -1.12
PPP4R1-216ENST00000580283 PFASO15067 1338 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 CACNA1FO60840 1977 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 LTBP2Q14767 1821 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 C2orf71A6NGG8 1288 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 WDHD1O75717 1129 aaPredicted RBP8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 MPOP05164 745 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 GYG1P46976 350 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 KCNJ4P48050 445 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 GCKRQ14397 625 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 KIR3DS1Q14943 382 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 SV2CQ496J9 727 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 APOBEC3HQ6NTF7 200 aaKnown RBP8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 ANKS3Q6ZW76 656 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 ZNF804AQ7Z570 1209 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 MCMBPQ9BTE3 642 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 EMC9Q9Y3B6 208 aa8.04□□□□□ -1.12
PPP4R1-216ENST00000580283 NCOR1O75376 2440 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 PEX10O60683 326 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 TSPAN15O95858 294 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 CAPN2P17655 700 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 SDHBP21912 280 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 TMEM62Q0P6H9 643 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 EPHA10Q5JZY3 1008 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 OLFML2BQ68BL8 750 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 FAM83AQ86UY5 434 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 ZNF513Q8N8E2 541 aaPredicted RBP8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 HNRNPLLQ8WVV9 542 aaKnown RBP8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 CDX2Q99626 313 aaPredicted RBP8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.03□□□□□ -1.121e-10■■□□□ 13.3
PPP4R1-216ENST00000580283 GJD2Q9UKL4 321 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 MYH13Q9UKX3 1938 aa8.03□□□□□ -1.12
PPP4R1-216ENST00000580283 XIRP2A4UGR9 3374 aa8.02□□□□□ -1.12
PPP4R1-216ENST00000580283 TRBV23OR9-2A0A075B6M9 112 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 TCAF2A6NFQ2 919 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 PLIN1O60240 522 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 SUSD5O60279 629 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 DDX58O95786 925 aaKnown RBP8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 L1CAMP32004 1257 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 ERVFRD-1P60508 538 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 FKBP1CQ5VVH2 108 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 RUNDC1Q96C34 613 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 ZNF341Q9BYN7 854 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 OGDHLQ9ULD0 1010 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 MYO9BQ13459 2157 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 MAST2Q6P0Q8 1798 aa8.02□□□□□ -1.13
PPP4R1-216ENST00000580283 RLFQ13129 1914 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 CHD7Q9P2D1 2997 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 A0A0G2JLL6 359 aaPredicted RBP8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 ANKRD18BA2A2Z9 1011 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 DBX1A6NMT0 343 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 ETV2O00321 342 aaPredicted RBP8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 ABLIM1O14639 778 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 SEMA7AO75326 666 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 C1QTNF9P0C862 333 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 COL6A1P12109 1028 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 PAMP19021 973 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 HIBADHP31937 336 aaKnown RBP8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 MVKQ03426 396 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 RAB3GAP1Q15042 981 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 LRRC26Q2I0M4 334 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 ATG14Q6ZNE5 492 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 EEPD1Q7L9B9 569 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 PRRT2Q7Z6L0 340 aaPredicted RBP8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 TRIM59Q8IWR1 403 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 ZFPM1Q8IX07 1006 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 MRIQ9BWK5 157 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 PUS3Q9BZE2 481 aaKnown RBP8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 C11orf49Q9H6J7 331 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 ST7Q9NRC1 585 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 SIRT5Q9NXA8 310 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 AFG3L2Q9Y4W6 797 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 DOCK2Q92608 1830 aa8.01□□□□□ -1.13
PPP4R1-216ENST00000580283 DOCK1Q14185 1865 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 MYH2Q9UKX2 1941 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 NPHP3-ACAD11A0A0J9YXS1 232 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 TEX51A0A1B0GUA7 166 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 MYOCOSA0A1B0GUC4 107 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 NUDT19A8MXV4 375 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 HRKO00198 91 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 CXCL11O14625 94 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 TNPO2O14787 897 aaKnown RBP8□□□□□ -1.13
PPP4R1-216ENST00000580283 STK10O94804 968 aaKnown RBP8□□□□□ -1.13
PPP4R1-216ENST00000580283 GJB6O95452 261 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 GLDCP23378 1020 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 CORO7P57737 925 aa8□□□□□ -1.13
PPP4R1-216ENST00000580283 SRSF3P84103 164 aaKnown RBP8□□□□□ -1.13
PPP4R1-216ENST00000580283 SCRN1Q12765 414 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms