RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 LAMTOR4Q0VGL1 99 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 ST3GAL1Q11201 340 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 CTTNQ14247 550 aaKnown RBP12.88□□□□□ -0.35
SSH2-208ENST00000579040 PCBP1Q15365 356 aaKnown RBP eCLIP12.88□□□□□ -0.356e-8■■■□□ 18.8
SSH2-208ENST00000579040 CLUL1Q15846 466 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 DUSP6Q16828 381 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 TMEM31Q5JXX7 168 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 RBM23Q86U06 439 aaKnown RBP12.88□□□□□ -0.35
SSH2-208ENST00000579040 KSR1Q8IVT5 923 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 TPH2Q8IWU9 490 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 SLC39A11Q8N1S5 342 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 SMRP1Q8NCR6 262 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 PRPF31Q8WWY3 499 aaKnown RBP12.88□□□□□ -0.35
SSH2-208ENST00000579040 TMEM143Q96AN5 459 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 MTRQ99707 1265 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 HSD17B14Q9BPX1 270 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 EIF2AK1Q9BQI3 630 aaKnown RBP12.88□□□□□ -0.35
SSH2-208ENST00000579040 ANKEF1Q9NU02 776 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 CLEC1BQ9P126 229 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 PCDHGC5Q9Y5F6 944 aa12.88□□□□□ -0.35
SSH2-208ENST00000579040 TDRD15B5MCY1 1934 aaKnown RBP12.88□□□□□ -0.35
SSH2-208ENST00000579040 SLITRK3O94933 977 aa12.87□□□□□ -0.35
SSH2-208ENST00000579040 ALDH7A1P49419 539 aaKnown RBP12.87□□□□□ -0.35
SSH2-208ENST00000579040 FOSBP53539 338 aa12.87□□□□□ -0.35
SSH2-208ENST00000579040 HMGN5P82970 282 aaKnown RBP12.87□□□□□ -0.35
SSH2-208ENST00000579040 POU5F1BQ06416 359 aa12.87□□□□□ -0.35
SSH2-208ENST00000579040 ORC2Q13416 577 aaPredicted RBP12.87□□□□□ -0.35
SSH2-208ENST00000579040 MXD4Q14582 209 aaPredicted RBP12.87□□□□□ -0.35
SSH2-208ENST00000579040 GLB1LQ6UWU2 654 aa12.87□□□□□ -0.35
SSH2-208ENST00000579040 FERMT3Q86UX7 667 aa12.87□□□□□ -0.35
SSH2-208ENST00000579040 PGBD4Q96DM1 585 aa12.87□□□□□ -0.35
SSH2-208ENST00000579040 ZSCAN31Q96LW9 406 aaPredicted RBP12.87□□□□□ -0.35
SSH2-208ENST00000579040 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
SSH2-208ENST00000579040 TCF25Q9BQ70 676 aa12.87□□□□□ -0.35
SSH2-208ENST00000579040 LRFN3Q9BTN0 628 aa12.87□□□□□ -0.35
SSH2-208ENST00000579040 ENTPD7Q9NQZ7 604 aa12.87□□□□□ -0.35
SSH2-208ENST00000579040 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
SSH2-208ENST00000579040 WNT7AO00755 349 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 DCXO43602 365 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 DGAT1O75907 488 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 SRGAP2CP0DJJ0 459 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 XRCC6P12956 609 aaKnown RBP eCLIP12.86□□□□□ -0.35
SSH2-208ENST00000579040 PBX3P40426 434 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 TXKP42681 527 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 BCAR1P56945 870 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 TFDP1Q14186 410 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 BMS1Q14692 1282 aaKnown RBP12.86□□□□□ -0.35
SSH2-208ENST00000579040 NOMO2Q5JPE7 1267 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 PLPP4Q5VZY2 271 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 TMEM184AQ6ZMB5 413 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 MRPL10Q7Z7H8 261 aaKnown RBP12.86□□□□□ -0.35
SSH2-208ENST00000579040 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
SSH2-208ENST00000579040 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 C8orf76Q96K31 380 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 CCDC43Q96MW1 224 aaKnown RBP12.86□□□□□ -0.35
SSH2-208ENST00000579040 FOXP1Q9H334 677 aaPredicted RBP12.86□□□□□ -0.35
SSH2-208ENST00000579040 MINDY3Q9H8M7 445 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 XPNPEP1Q9NQW7 623 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 BARX2Q9UMQ3 279 aaPredicted RBP12.86□□□□□ -0.35
SSH2-208ENST00000579040 CNTNAP2Q9UHC6 1331 aa12.86□□□□□ -0.35
SSH2-208ENST00000579040 PER2O15055 1255 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 ZBTB39O15060 712 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 ZC3H11AO75152 810 aaKnown RBP eCLIP12.85□□□□□ -0.35
SSH2-208ENST00000579040 ERLIN2O94905 339 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 AXLP30530 894 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 HOXA11P31270 313 aaPredicted RBP12.85□□□□□ -0.35
SSH2-208ENST00000579040 PTENP60484 403 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 KCNC3Q14003 757 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 SMC1AQ14683 1233 aaKnown RBP12.85□□□□□ -0.35
SSH2-208ENST00000579040 TMC7Q7Z402 723 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 CNNM3Q8NE01 707 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 URGCPQ8TCY9 931 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 LPPQ93052 612 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 CCDC51Q96ER9 411 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 TMEM169Q96HH4 297 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 TUFT1Q9NNX1 390 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 C11orf16Q9NQ32 467 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
SSH2-208ENST00000579040 TBC1D13Q9NVG8 400 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 USP15Q9Y4E8 981 aaPredicted RBP12.85□□□□□ -0.35
SSH2-208ENST00000579040 PCDHB2Q9Y5E7 798 aa12.85□□□□□ -0.35
SSH2-208ENST00000579040 POTEMA6NI47 508 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 OFD1O75665 1012 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 HOXB8P17481 243 aaPredicted RBP12.84□□□□□ -0.35
SSH2-208ENST00000579040 MCM7P33993 719 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 RARRES1P49788 294 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 RNASELQ05823 741 aaKnown RBP12.84□□□□□ -0.35
SSH2-208ENST00000579040 NCBP1Q09161 790 aaKnown RBP12.84□□□□□ -0.35
SSH2-208ENST00000579040 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 NOTUMQ6P988 496 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 MRPL43Q8N983 215 aaKnown RBP12.84□□□□□ -0.35
SSH2-208ENST00000579040 FBXO18Q8NFZ0 1043 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 VN1R2Q8NFZ6 395 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 KIF2CQ99661 725 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 NFKBIZQ9BYH8 718 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 TMEM60Q9H2L4 133 aa12.84□□□□□ -0.35
SSH2-208ENST00000579040 NRDE2Q9H7Z3 1164 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms