RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 TMEM192Q8IY95 271 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 FBXO22Q8NEZ5 403 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 GDPD5Q8WTR4 605 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 BSNDQ8WZ55 320 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 KIFAP3Q92845 792 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 CCSER1Q9C0I3 900 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 MTUS1Q9ULD2 1270 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 SRPRBQ9Y5M8 271 aaKnown RBP16.02■□□□□ 0.16
MKS1-207ENST00000578789 MRPL42Q9Y6G3 142 aaKnown RBP16.02■□□□□ 0.16
MKS1-207ENST00000578789 TRANK1O15050 2925 aa16.02■□□□□ 0.15
MKS1-207ENST00000578789 INO80B-WBP1J3KQ70 363 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 TSPAN1O60635 241 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 ZNF623O75123 536 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 ERLIN2O94905 339 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 EOMESO95936 686 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 F13A1P00488 732 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 FGFR1P11362 822 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 SKIP12755 728 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 HOXA11P31270 313 aaPredicted RBP16.01■□□□□ 0.15
MKS1-207ENST00000578789 UBA7P41226 1012 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 NAMPTP43490 491 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 SLC39A14Q15043 492 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 PPP2R5AQ15172 486 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 TWF2Q6IBS0 349 aaKnown RBP16.01■□□□□ 0.15
MKS1-207ENST00000578789 RINT1Q6NUQ1 792 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 C1orf186Q6ZWK4 172 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 CCDC51Q96ER9 411 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 CALML4Q96GE6 196 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 CDK5RAP3Q96JB5 506 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 RUSC1Q9BVN2 902 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 TIPINQ9BVW5 301 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 TMEM117Q9H0C3 514 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 FAM105AQ9NUU6 356 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 LMCD1Q9NZU5 365 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 MTCH2Q9Y6C9 303 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 ATG2AQ2TAZ0 1938 aa16.01■□□□□ 0.15
MKS1-207ENST00000578789 LRRIQ4A6NIV6 560 aa16■□□□□ 0.15
MKS1-207ENST00000578789 TBKBP1A7MCY6 615 aa16■□□□□ 0.15
MKS1-207ENST00000578789 H3BNC9 293 aa16■□□□□ 0.15
MKS1-207ENST00000578789 RB1P06400 928 aa16■□□□□ 0.15
MKS1-207ENST00000578789 IBSPP21815 317 aaPredicted RBP16■□□□□ 0.15
MKS1-207ENST00000578789 GUCY2CP25092 1073 aa16■□□□□ 0.15
MKS1-207ENST00000578789 MARCKSP29966 332 aaPredicted RBP16■□□□□ 0.15
MKS1-207ENST00000578789 SLC12A3P55017 1021 aa16■□□□□ 0.15
MKS1-207ENST00000578789 PKP1Q13835 747 aa16■□□□□ 0.15
MKS1-207ENST00000578789 ZRSR1Q15695 479 aaKnown RBP16■□□□□ 0.15
MKS1-207ENST00000578789 FAM187BQ17R55 369 aa16■□□□□ 0.15
MKS1-207ENST00000578789 PAN2Q504Q3 1202 aaKnown RBP16■□□□□ 0.15
MKS1-207ENST00000578789 UBXN11Q5T124 520 aa16■□□□□ 0.15
MKS1-207ENST00000578789 ZBTB8OSQ8IWT0 167 aa16■□□□□ 0.15
MKS1-207ENST00000578789 SYT2Q8N9I0 419 aaPredicted RBP16■□□□□ 0.15
MKS1-207ENST00000578789 SPRYD3Q8NCJ5 442 aa16■□□□□ 0.15
MKS1-207ENST00000578789 LRRC15Q8TF66 581 aa16■□□□□ 0.15
MKS1-207ENST00000578789 RSPH1Q8WYR4 309 aa16■□□□□ 0.15
MKS1-207ENST00000578789 ZNF396Q96N95 335 aaPredicted RBP16■□□□□ 0.15
MKS1-207ENST00000578789 PLIN2Q99541 437 aa16■□□□□ 0.15
MKS1-207ENST00000578789 PLVAPQ9BX97 442 aa16■□□□□ 0.15
MKS1-207ENST00000578789 CSRNP2Q9H175 543 aa16■□□□□ 0.15
MKS1-207ENST00000578789 C2orf40Q9H1Z8 148 aa16■□□□□ 0.15
MKS1-207ENST00000578789 KCND2Q9NZV8 630 aa16■□□□□ 0.15
MKS1-207ENST00000578789 MYH11P35749 1972 aa16■□□□□ 0.15
MKS1-207ENST00000578789 GTPBP6O43824 516 aaPredicted RBP15.99■□□□□ 0.15
MKS1-207ENST00000578789 HIP1RO75146 1068 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 YEATS4O95619 227 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 PLA2G4BP0C869 781 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 IGFBP4P22692 258 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 CTNNB1P35222 781 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 BMPR1AP36894 532 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 CEBPZQ03701 1054 aaKnown RBP15.99■□□□□ 0.15
MKS1-207ENST00000578789 MAPK7Q13164 816 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 CLLU1OSQ5K130 101 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 NOTUMQ6P988 496 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 DAW1Q8N136 415 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 LINC00301Q8NCQ3 95 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 IFT74Q96LB3 600 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 PRIMPOLQ96LW4 560 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 DRC1Q96MC2 740 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 CASD1Q96PB1 797 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 CCDC113Q9H0I3 377 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 FZD8Q9H461 694 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 BLOC1S4Q9NUP1 217 aa15.99■□□□□ 0.15
MKS1-207ENST00000578789 PRMT7Q9NVM4 692 aaPredicted RBP15.99■□□□□ 0.15
MKS1-207ENST00000578789 CNTNAP2Q9UHC6 1331 aa15.98■□□□□ 0.15
MKS1-207ENST00000578789 ARF4P18085 180 aaPredicted RBP15.98■□□□□ 0.15
MKS1-207ENST00000578789 PLCG1P19174 1290 aa15.98■□□□□ 0.15
MKS1-207ENST00000578789 KARSQ15046 597 aaKnown RBP15.98■□□□□ 0.15
MKS1-207ENST00000578789 NAALADL2Q58DX5 795 aa15.98■□□□□ 0.15
MKS1-207ENST00000578789 MRPL10Q7Z7H8 261 aaKnown RBP15.98■□□□□ 0.15
MKS1-207ENST00000578789 LRRC43Q8N309 656 aa15.98■□□□□ 0.15
MKS1-207ENST00000578789 KRI1Q8N9T8 703 aaKnown RBP15.98■□□□□ 0.15
MKS1-207ENST00000578789 DEPTORQ8TB45 409 aa15.98■□□□□ 0.15
MKS1-207ENST00000578789 SYMPKQ92797 1274 aaKnown RBP15.98■□□□□ 0.15
MKS1-207ENST00000578789 P2RX5Q93086 422 aa15.98■□□□□ 0.15
MKS1-207ENST00000578789 CLIC6Q96NY7 704 aa15.98■□□□□ 0.15
MKS1-207ENST00000578789 C11orf84Q9BUA3 381 aaPredicted RBP15.98■□□□□ 0.15
MKS1-207ENST00000578789 C17orf75Q9HAS0 396 aa15.98■□□□□ 0.15
MKS1-207ENST00000578789 PCDHB2Q9Y5E7 798 aa15.98■□□□□ 0.15
MKS1-207ENST00000578789 PRRC2BQ5JSZ5 2229 aaKnown RBP15.98■□□□□ 0.15
MKS1-207ENST00000578789 PLXNA4Q9HCM2 1894 aa15.97■□□□□ 0.15
MKS1-207ENST00000578789 B4GALT5O43286 388 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms