RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 SLC39A2Q9NP94 309 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 PRKAG2Q9UGJ0 569 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 GDAQ9Y2T3 454 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 SIP14410 1827 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 DENND3A2RUS2 1198 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 RHOBTB3O94955 611 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 GHRP10912 638 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 RAG1P15918 1043 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 FGFR4P22455 802 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 CASP5P51878 434 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 CRYBB1P53674 252 aaPredicted RBP13.37□□□□□ -0.27
IFT20-207ENST00000578547 NCKAP1LP55160 1127 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 CDC42EP1Q00587 391 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 EHHADHQ08426 723 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 KCNB1Q14721 858 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 ZC2HC1CQ53FD0 456 aaPredicted RBP13.37□□□□□ -0.27
IFT20-207ENST00000578547 FAM26DQ5JW98 314 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 CDCA2Q69YH5 1023 aaPredicted RBP13.37□□□□□ -0.27
IFT20-207ENST00000578547 HAUS6Q7Z4H7 955 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 SMYD4Q8IYR2 804 aaPredicted RBP13.37□□□□□ -0.27
IFT20-207ENST00000578547 TMEM161BQ8NDZ6 487 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 SPATA20Q8TB22 786 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 TMEM40Q8WWA1 233 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 SCLYQ96I15 445 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 WNT8AQ9H1J5 351 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 C2orf40Q9H1Z8 148 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 IFT122Q9HBG6 1241 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 OLFML3Q9NRN5 406 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 KCNG1Q9UIX4 513 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 NR2E3Q9Y5X4 410 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 TANC1Q9C0D5 1861 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 PHLPP2Q6ZVD8 1323 aa13.37□□□□□ -0.27
IFT20-207ENST00000578547 H0YCG3 227 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 IQCF3P0C7M6 154 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 MAPTP10636 758 aaKnown RBP13.36□□□□□ -0.27
IFT20-207ENST00000578547 DARSP14868 501 aaKnown RBP13.36□□□□□ -0.27
IFT20-207ENST00000578547 SARSP49591 514 aaKnown RBP13.36□□□□□ -0.27
IFT20-207ENST00000578547 EFNA5P52803 228 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 PTENP60484 403 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 MLLT1Q03111 559 aaPredicted RBP13.36□□□□□ -0.27
IFT20-207ENST00000578547 MBTD1Q05BQ5 628 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 STK4Q13043 487 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 PSMD2Q13200 908 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 GPNMBQ14956 572 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 L1TD1Q5T7N2 865 aaKnown RBP13.36□□□□□ -0.27
IFT20-207ENST00000578547 NT5DC1Q5TFE4 455 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 STXBP4Q6ZWJ1 553 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 KIAA0895Q8NCT3 520 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 SLC17A8Q8NDX2 589 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 BADQ92934 168 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 FIZ1Q96SL8 496 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 OSBPL7Q9BZF2 842 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 GZF1Q9H116 711 aaPredicted RBP13.36□□□□□ -0.27
IFT20-207ENST00000578547 MINDY3Q9H8M7 445 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 ARHGAP28Q9P2N2 729 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 MAPK8IP1Q9UQF2 711 aa13.36□□□□□ -0.27
IFT20-207ENST00000578547 SYCE3A1L190 88 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 K7ERI5 159 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 RPS6KA5O75582 802 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 ERLIN2O94905 339 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 PRPF6O94906 941 aaKnown RBP13.35□□□□□ -0.27
IFT20-207ENST00000578547 PRKCBP05771 671 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 SFPQP23246 707 aaKnown RBP eCLIP13.35□□□□□ -0.27
IFT20-207ENST00000578547 EIF4BP23588 611 aaKnown RBP13.35□□□□□ -0.27
IFT20-207ENST00000578547 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
IFT20-207ENST00000578547 POU5F1BQ06416 359 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 STRN3Q13033 797 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 MORC3Q14149 939 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 LPIN1Q14693 890 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 MBTPS1Q14703 1052 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 MAPK6Q16659 721 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 TMEM132AQ24JP5 1023 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 FBXO47Q5MNV8 452 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 ZNF658Q5TYW1 1059 aaPredicted RBP13.35□□□□□ -0.27
IFT20-207ENST00000578547 MFSD5Q6N075 450 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 SASS6Q6UVJ0 657 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 RBM43Q6ZSC3 357 aaKnown RBP13.35□□□□□ -0.27
IFT20-207ENST00000578547 CATSPER4Q7RTX7 472 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 ZNF720Q7Z2F6 126 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 SRGAP1Q7Z6B7 1085 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 NELFCDQ8IXH7 590 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 BICD1Q96G01 975 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 NTPCRQ9BSD7 190 aaKnown RBP13.35□□□□□ -0.27
IFT20-207ENST00000578547 NFKBIZQ9BYH8 718 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 CCDC113Q9H0I3 377 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 USP20Q9Y2K6 914 aa13.35□□□□□ -0.27
IFT20-207ENST00000578547 NOC2LQ9Y3T9 749 aaKnown RBP13.35□□□□□ -0.27
IFT20-207ENST00000578547 H0YGN5 161 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 B4GALT5O43286 388 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 NBNO60934 754 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 CSF2RAP15509 400 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 CD52P31358 61 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 NFX1Q12986 1120 aaKnown RBP13.34□□□□□ -0.27
IFT20-207ENST00000578547 PAK2Q13177 524 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 ALCAMQ13740 583 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 ZSCAN23Q3MJ62 389 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 TSHZ1Q6ZSZ6 1077 aa13.34□□□□□ -0.27
IFT20-207ENST00000578547 TAS1R3Q7RTX0 852 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms