RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 BCAS3Q9H6U6 928 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 PARVGQ9HBI0 331 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 AGO4Q9HCK5 861 aaKnown RBP12.4□□□□□ -0.42
GGA3-205ENST00000578348 KCNH7Q9NS40 1196 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 GCNT4Q9P109 453 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 PPP2R3BQ9Y5P8 575 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 ARHGEF35A5YM69 484 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 KRIT1O00522 736 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 CLIC2O15247 247 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 KIAA0754O94854 1291 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 PTPRAP18433 802 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 GUCY2CP25092 1073 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 MDH1P40925 334 aaKnown RBP12.4□□□□□ -0.42
GGA3-205ENST00000578348 SEC24CP53992 1094 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 ITGB3BPQ13352 177 aaPredicted RBP12.4□□□□□ -0.42
GGA3-205ENST00000578348 CUL1Q13616 776 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 NFIL3Q16649 462 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 ANGEL2Q5VTE6 544 aaKnown RBP12.4□□□□□ -0.42
GGA3-205ENST00000578348 NAA35Q5VZE5 725 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 STXBP4Q6ZWJ1 553 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 WRNIP1Q96S55 665 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 NEUROG2Q9H2A3 272 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 METTL14Q9HCE5 456 aaKnown RBP12.4□□□□□ -0.42
GGA3-205ENST00000578348 WRAP73Q9P2S5 460 aaPredicted RBP12.4□□□□□ -0.42
GGA3-205ENST00000578348 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
GGA3-205ENST00000578348 PHIPQ8WWQ0 1821 aa12.4□□□□□ -0.43
GGA3-205ENST00000578348 VWA5AO00534 786 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 NR3C1P04150 777 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 MYZAPP0CAP1 466 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 KCNA4P22459 653 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 CTNNA1P35221 906 aaKnown RBP12.39□□□□□ -0.43
GGA3-205ENST00000578348 PRKCIP41743 596 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 RPS6P62753 249 aaKnown RBP12.39□□□□□ -0.43
GGA3-205ENST00000578348 KCNA1Q09470 495 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 PTGISQ16647 500 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 FBXW10Q5XX13 1052 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 DAAM2Q86T65 1068 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 VPS36Q86VN1 386 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 MYCT1Q8N699 235 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.39□□□□□ -0.43
GGA3-205ENST00000578348 TAAR1Q96RJ0 339 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.439e-7■■■■□ 19.3
GGA3-205ENST00000578348 TMBIM4Q9HC24 238 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 HOMER2Q9NSB8 354 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 AMACRQ9UHK6 382 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 FAM170AA1A519 330 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 DHX15O43143 795 aaKnown RBP12.39□□□□□ -0.43
GGA3-205ENST00000578348 P4HBP07237 508 aaKnown RBP12.39□□□□□ -0.43
GGA3-205ENST00000578348 H2AFZP0C0S5 128 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 ITGA4P13612 1032 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 OAZ1P54368 228 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 MRPS9P82933 396 aaKnown RBP12.39□□□□□ -0.43
GGA3-205ENST00000578348 MTMR1Q13613 665 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 PGM5Q15124 567 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 UAP1Q16222 522 aaPredicted RBP12.39□□□□□ -0.43
GGA3-205ENST00000578348 XRRA1Q6P2D8 792 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 RNF207Q6ZRF8 634 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 H2AFVQ71UI9 128 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 BANK1Q8NDB2 785 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 ZNF473Q8WTR7 871 aaKnown RBP12.39□□□□□ -0.43
GGA3-205ENST00000578348 U2AF1L4Q8WU68 220 aaKnown RBP12.39□□□□□ -0.43
GGA3-205ENST00000578348 SLC35C1Q96A29 364 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 ATG4CQ96DT6 458 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 CALR3Q96L12 384 aaKnown RBP12.39□□□□□ -0.43
GGA3-205ENST00000578348 SIX2Q9NPC8 291 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 TBC1D22BQ9NU19 505 aa12.39□□□□□ -0.43
GGA3-205ENST00000578348 ZMYM2Q9UBW7 1377 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 SFI1A8K8P3 1242 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 C19orf81C9J6K1 198 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 E7EVH7 732 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 DDX39AO00148 427 aaKnown RBP12.38□□□□□ -0.43
GGA3-205ENST00000578348 GFPT2O94808 682 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
GGA3-205ENST00000578348 EMC10Q5UCC4 262 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 OTUD6BQ8N6M0 293 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 TRPM4Q8TD43 1214 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 UBLCP1Q8WVY7 318 aaPredicted RBP12.38□□□□□ -0.43
GGA3-205ENST00000578348 LRRC45Q96CN5 670 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 MYCBPQ99417 103 aaPredicted RBP12.38□□□□□ -0.43
GGA3-205ENST00000578348 NCAPGQ9BPX3 1015 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 PDCD2LQ9BRP1 358 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 IKZF4Q9H2S9 585 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 PPANQ9NQ55 473 aaKnown RBP12.38□□□□□ -0.43
GGA3-205ENST00000578348 PXMP2Q9NR77 195 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 RNF146Q9NTX7 359 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 GPRC5DQ9NZD1 345 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 BCCIPQ9P287 314 aaKnown RBP eCLIP12.38□□□□□ -0.43
GGA3-205ENST00000578348 DBR1Q9UK59 544 aaKnown RBP12.38□□□□□ -0.43
GGA3-205ENST00000578348 RLFQ13129 1914 aa12.38□□□□□ -0.43
GGA3-205ENST00000578348 DICER1Q9UPY3 1922 aaKnown RBP12.38□□□□□ -0.43
GGA3-205ENST00000578348 DDX3XO00571 662 aaKnown RBP eCLIP12.37□□□□□ -0.43
GGA3-205ENST00000578348 ZBTB39O15060 712 aa12.37□□□□□ -0.43
GGA3-205ENST00000578348 MEFVO15553 781 aaPredicted RBP12.37□□□□□ -0.43
GGA3-205ENST00000578348 DAPK3O43293 454 aa12.37□□□□□ -0.43
GGA3-205ENST00000578348 LYPLA2O95372 231 aa12.37□□□□□ -0.43
GGA3-205ENST00000578348 ZBTB48P10074 688 aaPredicted RBP12.37□□□□□ -0.43
GGA3-205ENST00000578348 FLT3P36888 993 aa12.37□□□□□ -0.43
GGA3-205ENST00000578348 JAM2P57087 298 aa12.37□□□□□ -0.43
GGA3-205ENST00000578348 NOL9Q5SY16 702 aaKnown RBP12.37□□□□□ -0.43
GGA3-205ENST00000578348 LRIG3Q6UXM1 1119 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms