RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 SAMD3Q8N6K7 520 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TMEM35BQ8NCS4 154 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 GRK7Q8WTQ7 553 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SCG3Q8WXD2 468 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 P3H4Q92791 437 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 DDX27Q96GQ7 796 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 RIPOR3Q96MK2 946 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PNMA5Q96PV4 448 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TSSK1BQ9BXA7 367 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SIK2Q9H0K1 926 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 HCN4Q9Y3Q4 1203 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SNX14Q9Y5W7 946 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 GOLGA8IPA6NC78 632 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 GOLGA8JA6NMD2 632 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 AKR1B15C9JRZ8 316 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 POLRMTO00411 1230 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 LZTS3O60299 673 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 NPM3O75607 178 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 MYL1P05976 194 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 H2AFZP0C0S5 128 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CYP2C8P10632 490 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 RALBP11234 206 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ODC1P11926 461 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SYT1P21579 422 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ADORA2BP29275 332 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ATP6V1E1P36543 226 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PNPLA4P41247 253 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 LIFRP42702 1097 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SLC26A2P50443 739 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 HSD17B4P51659 736 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 VAV2P52735 878 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SOX10P56693 466 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ERVK-9P63128 1117 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ERVK-24P63145 666 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SNW1Q13573 536 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CUL1Q13616 776 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 STILQ15468 1287 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 NFE2Q16621 373 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 MYSM1Q5VVJ2 828 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 E4F1Q66K89 784 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 DENND2CQ68D51 928 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CTR9Q6PD62 1173 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 H2AFVQ71UI9 128 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 INTS8Q75QN2 995 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 RRAGAQ7L523 313 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ANKRD23Q86SG2 305 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 DSG4Q86SJ6 1040 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 IGSF22Q8N9C0 903 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 XXYLT1Q8NBI6 393 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 MCUQ8NE86 351 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CCHCR1Q8TD31 782 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 MRRFQ96E11 262 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 WNK4Q96J92 1243 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 DNAJC7Q99615 494 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CALN1Q9BXU9 219 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SEZ6LQ9BYH1 1024 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 MUC3BQ9H195 1237 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ASCC2Q9H1I8 757 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CYP4F11Q9HBI6 524 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 MRPL17Q9NRX2 175 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM114A2Q9NRY5 505 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM207AQ9NSI2 230 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 EMILIN3Q9NT22 766 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ZSWIM5Q9P217 1185 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 FBXO10Q9UK96 956 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PRR12Q9ULL5 1215 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF148Q9UQR1 794 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM95CA0A1B0GW59 222 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 WNT10BO00744 389 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CLIC2O15247 247 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SLC16A4O15374 487 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CEP104O60308 925 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PGK2P07205 417 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ADH1AP07327 375 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ZBTB48P10074 688 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 VCLP18206 1134 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PAMP19021 973 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TBXAS1P24557 533 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ADORA2AP29274 412 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SDC4P31431 198 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PHBP35232 272 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ADCYAP1R1P41586 468 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SLC11A2P49281 568 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PAPOLAP51003 745 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 USP11P51784 963 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 IRX4P78413 519 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 LMNB2Q03252 620 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CDH18Q13634 790 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 KARSQ15046 597 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 RPS6KA1Q15418 735 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF827Q17R98 1081 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 EFHC2Q5JST6 749 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PSRC1Q6PGN9 363 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 MICALCLQ6ZW33 695 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CROCCP2Q86T23 111 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ADGRF4Q8IZF3 695 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 RPTORQ8N122 1335 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SRBD1Q8N5C6 995 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 C12orf50Q8NA57 414 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms