RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 ZNF512Q96ME7 567 aaPredicted RBP6.99□□□□□ -1.29
SMCHD1-202ENST00000577300 PRRX2Q99811 253 aa6.99□□□□□ -1.29
SMCHD1-202ENST00000577300 HIST1H2AJQ99878 128 aa6.99□□□□□ -1.29
SMCHD1-202ENST00000577300 SOX7Q9BT81 388 aa6.99□□□□□ -1.29
SMCHD1-202ENST00000577300 POFUT1Q9H488 388 aa6.99□□□□□ -1.29
SMCHD1-202ENST00000577300 IFT57Q9NWB7 429 aa6.99□□□□□ -1.29
SMCHD1-202ENST00000577300 GOLGA6L6A8MZA4 724 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 GAS7O60861 476 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 IPO13O94829 963 aaKnown RBP6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 APOL3O95236 402 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 CD40P25942 277 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 DSG1Q02413 1049 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 CCDC144BQ3MJ40 725 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 ZNF627Q7L945 461 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 MDGA1Q8NFP4 955 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 UBXN4Q92575 508 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 ARL8AQ96BM9 186 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 UIMC1Q96RL1 719 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 MNTQ99583 582 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 NOL10Q9BSC4 688 aaKnown RBP6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 GPRC5BQ9NZH0 403 aa6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 H2AFY2Q9P0M6 372 aaPredicted RBP6.98□□□□□ -1.29
SMCHD1-202ENST00000577300 FAM83GA6ND36 823 aa6.97□□□□□ -1.29
SMCHD1-202ENST00000577300 NPEPPSP55786 919 aa6.97□□□□□ -1.29
SMCHD1-202ENST00000577300 C1QL3Q5VWW1 255 aa6.97□□□□□ -1.29
SMCHD1-202ENST00000577300 NAIF1Q69YI7 327 aaPredicted RBP6.97□□□□□ -1.29
SMCHD1-202ENST00000577300 MRGPRGQ86SM5 289 aa6.97□□□□□ -1.29
SMCHD1-202ENST00000577300 PASD1Q8IV76 773 aa6.97□□□□□ -1.29
SMCHD1-202ENST00000577300 ELOA2Q8IYF1 753 aaPredicted RBP6.97□□□□□ -1.29
SMCHD1-202ENST00000577300 DRC1Q96MC2 740 aa6.97□□□□□ -1.29
SMCHD1-202ENST00000577300 USP36Q9P275 1121 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-202ENST00000577300 GAAP10253 952 aa6.96□□□□□ -1.3
SMCHD1-202ENST00000577300 PTGS2P35354 604 aa6.96□□□□□ -1.3
SMCHD1-202ENST00000577300 RABL3Q5HYI8 236 aa6.96□□□□□ -1.3
SMCHD1-202ENST00000577300 UNC5BQ8IZJ1 945 aa6.96□□□□□ -1.3
SMCHD1-202ENST00000577300 ATXN2LQ8WWM7 1075 aaKnown RBP6.96□□□□□ -1.3
SMCHD1-202ENST00000577300 RNPC3Q96LT9 517 aaKnown RBP6.96□□□□□ -1.3
SMCHD1-202ENST00000577300 MTFR1LQ9H019 292 aa6.96□□□□□ -1.3
SMCHD1-202ENST00000577300 NCDNQ9UBB6 729 aa6.96□□□□□ -1.3
SMCHD1-202ENST00000577300 TRPS1Q9UHF7 1281 aa6.96□□□□□ -1.3
SMCHD1-202ENST00000577300 MYPNQ86TC9 1320 aa6.96□□□□□ -1.3
SMCHD1-202ENST00000577300 ELL2O00472 640 aaPredicted RBP6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 NRP1O14786 923 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 KPNA6O60684 536 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 DCAF17Q5H9S7 520 aaPredicted RBP6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 GPR158Q5T848 1215 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 PCSK4Q6UW60 755 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 Q6ZPA2 131 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 APBB1IPQ7Z5R6 666 aaPredicted RBP6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 LRRTM3Q86VH5 581 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 HOMER1Q86YM7 354 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 NXPE1Q8N323 547 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 CHTF18Q8WVB6 975 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 ST8SIA2Q92186 375 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 ENKD1Q9H0I2 346 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 CD2APQ9Y5K6 639 aa6.95□□□□□ -1.3
SMCHD1-202ENST00000577300 ZNF891A8MT65 544 aaPredicted RBP6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 TGM5O43548 720 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 KRT4P19013 534 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 NEK4P51957 841 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 ESPNLQ6ZVH7 1005 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 C16orf86Q6ZW13 317 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 MB21D1Q8N884 522 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 CDYL2Q8N8U2 506 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 PIK3C3Q8NEB9 887 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 SLC25A43Q8WUT9 341 aaPredicted RBP6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 HAS1Q92839 578 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 NINJ1Q92982 152 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 PIF1Q9H611 641 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 PCDHB6Q9Y5E3 794 aa6.94□□□□□ -1.3
SMCHD1-202ENST00000577300 GRXCR1A8MXD5 290 aa6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 RPS6KA4O75676 772 aa6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 STC2O76061 302 aa6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 PCDH8O95206 1070 aa6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 GNAT2P19087 354 aa6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 MRGPREQ86SM8 312 aa6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 LENG9Q96B70 501 aa6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 NRDE2Q9H7Z3 1164 aa6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 THG1LQ9NWX6 298 aaKnown RBP6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 ING3Q9NXR8 418 aa6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 DMRT1Q9Y5R6 373 aa6.93□□□□□ -1.3
SMCHD1-202ENST00000577300 TMEM191CA6NGB0 347 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 RAMP2O60895 175 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 FAM20BO75063 409 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 ALDH1A2O94788 518 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 PFKMP08237 780 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 GPR15P49685 360 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 KPNA1P52294 538 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 PHC1P78364 1004 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 CD69Q07108 199 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 METTL24Q5JXM2 366 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 RHOUQ7L0Q8 258 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 SMC1BQ8NDV3 1235 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 APPBP2Q92624 585 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 PGBD4Q96DM1 585 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 ZNF496Q96IT1 587 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 AGAP2Q99490 1192 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 PDCD2LQ9BRP1 358 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms