RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 KRT32Q14532 448 aa15.03■□□□□ -0
COPS3-214ENST00000577246 XKR3Q5GH77 459 aa15.03■□□□□ -0
COPS3-214ENST00000577246 KANK3Q6NY19 840 aa15.03■□□□□ -0
COPS3-214ENST00000577246 ZC3H14Q6PJT7 736 aaKnown RBP15.03■□□□□ -0
COPS3-214ENST00000577246 CCDC148Q8NFR7 591 aa15.03■□□□□ -0
COPS3-214ENST00000577246 CMASQ8NFW8 434 aaPredicted RBP15.03■□□□□ -0
COPS3-214ENST00000577246 NXPE3Q969Y0 559 aa15.03■□□□□ -0
COPS3-214ENST00000577246 KLHL5Q96PQ7 755 aa15.03■□□□□ -0
COPS3-214ENST00000577246 FAM193BQ96PV7 902 aaPredicted RBP15.03■□□□□ -0
COPS3-214ENST00000577246 TEKT3Q9BXF9 490 aa15.03■□□□□ -0
COPS3-214ENST00000577246 GBP3Q9H0R5 595 aa15.03■□□□□ -0
COPS3-214ENST00000577246 KANSL3Q9P2N6 904 aa15.03■□□□□ -0
COPS3-214ENST00000577246 SEPT9Q9UHD8 586 aaPredicted RBP15.03■□□□□ -0
COPS3-214ENST00000577246 BRPF3Q9ULD4 1205 aa15.03■□□□□ -0
COPS3-214ENST00000577246 NAP1L2Q9ULW6 460 aaPredicted RBP15.03■□□□□ -0
COPS3-214ENST00000577246 CHMP2AO43633 222 aa15.02■□□□□ -0
COPS3-214ENST00000577246 PI15O43692 258 aa15.02■□□□□ -0
COPS3-214ENST00000577246 CSDE1O75534 798 aaKnown RBP15.02■□□□□ -0
COPS3-214ENST00000577246 OFD1O75665 1012 aa15.02■□□□□ -0
COPS3-214ENST00000577246 EXOSC10Q01780 885 aaKnown RBP15.02■□□□□ -0
COPS3-214ENST00000577246 AKAP17AQ02040 695 aaKnown RBP15.02■□□□□ -0
COPS3-214ENST00000577246 TARBP2Q15633 366 aaKnown RBP15.02■□□□□ -0
COPS3-214ENST00000577246 LRCH2Q5VUJ6 765 aa15.02■□□□□ -0
COPS3-214ENST00000577246 CATSPER4Q7RTX7 472 aa15.02■□□□□ -0
COPS3-214ENST00000577246 LPPQ93052 612 aa15.02■□□□□ -0
COPS3-214ENST00000577246 LENG9Q96B70 501 aa15.02■□□□□ -0
COPS3-214ENST00000577246 TMEM175Q9BSA9 504 aa15.02■□□□□ -0
COPS3-214ENST00000577246 NIFKQ9BYG3 293 aaKnown RBP15.02■□□□□ -0
COPS3-214ENST00000577246 RHOBTB2Q9BYZ6 727 aa15.02■□□□□ -0
COPS3-214ENST00000577246 CNTNAP2Q9UHC6 1331 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 A0A087WZ62 844 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 ALDH2P05091 517 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 URODP06132 367 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 ADH1AP07327 375 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 CNPP09543 421 aaKnown RBP15.01□□□□□ -0.01
COPS3-214ENST00000577246 CDC27P30260 824 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 SLC11A1P49279 550 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 USP11P51784 963 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 MTERF2Q49AM1 385 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 RHPN2Q8IUC4 686 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 BCL7CQ8WUZ0 217 aaPredicted RBP15.01□□□□□ -0.01
COPS3-214ENST00000577246 CCDC136Q96JN2 1154 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 FDXACB1Q9BRP7 624 aaPredicted RBP15.01□□□□□ -0.01
COPS3-214ENST00000577246 FAM217BQ9NTX9 383 aaPredicted RBP15.01□□□□□ -0.01
COPS3-214ENST00000577246 SUCLA2Q9P2R7 463 aaPredicted RBP15.01□□□□□ -0.01
COPS3-214ENST00000577246 DNAJB4Q9UDY4 337 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 DMDP11532 3685 aa15.01□□□□□ -0.01
COPS3-214ENST00000577246 IGKV6-21A0A0C4DH24 114 aa15□□□□□ -0.01
COPS3-214ENST00000577246 MSH4O15457 936 aa15□□□□□ -0.01
COPS3-214ENST00000577246 GBP2P32456 591 aaPredicted RBP15□□□□□ -0.01
COPS3-214ENST00000577246 UGCGQ16739 394 aa15□□□□□ -0.01
COPS3-214ENST00000577246 LONRF3Q496Y0 759 aa15□□□□□ -0.01
COPS3-214ENST00000577246 MIER3Q7Z3K6 550 aa15□□□□□ -0.01
COPS3-214ENST00000577246 EXOC8Q8IYI6 725 aa15□□□□□ -0.01
COPS3-214ENST00000577246 SLC5A5Q92911 643 aa15□□□□□ -0.01
COPS3-214ENST00000577246 NLRP4Q96MN2 994 aa15□□□□□ -0.01
COPS3-214ENST00000577246 TCEANC2Q96MN5 208 aa15□□□□□ -0.01
COPS3-214ENST00000577246 C22orf23Q9BZE7 217 aa15□□□□□ -0.01
COPS3-214ENST00000577246 UNC45AQ9H3U1 944 aa15□□□□□ -0.01
COPS3-214ENST00000577246 RSAD1Q9HA92 442 aa15□□□□□ -0.01
COPS3-214ENST00000577246 WDR6Q9NNW5 1121 aaKnown RBP15□□□□□ -0.01
COPS3-214ENST00000577246 UBN1Q9NPG3 1134 aa15□□□□□ -0.01
COPS3-214ENST00000577246 MAN1C1Q9NR34 630 aa15□□□□□ -0.01
COPS3-214ENST00000577246 EPS15L1Q9UBC2 864 aa15□□□□□ -0.01
COPS3-214ENST00000577246 FAN1Q9Y2M0 1017 aa15□□□□□ -0.01
COPS3-214ENST00000577246 PCDHB2Q9Y5E7 798 aa15□□□□□ -0.01
COPS3-214ENST00000577246 EVPLQ92817 2033 aa15□□□□□ -0.01
COPS3-214ENST00000577246 FAM186AA6NE01 2351 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 CLUHO75153 1309 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 RIF1Q5UIP0 2472 aaKnown RBP14.99□□□□□ -0.01
COPS3-214ENST00000577246 PRPF3O43395 683 aaKnown RBP14.99□□□□□ -0.01
COPS3-214ENST00000577246 GLUD1P00367 558 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 SOD2P04179 222 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 SSBP05455 408 aaKnown RBP eCLIP14.99□□□□□ -0.01
COPS3-214ENST00000577246 CFHP08603 1231 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 SRFP11831 508 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 ADD1P35611 737 aaKnown RBP14.99□□□□□ -0.01
COPS3-214ENST00000577246 AK2P54819 239 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 DRP2Q13474 957 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 TSGA10IPQ3SY00 556 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 DGLUCYQ7Z3D6 616 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 HINFPQ9BQA5 517 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 VN1R3Q9BXE9 311 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 AGPAT5Q9NUQ2 364 aa14.99□□□□□ -0.01
COPS3-214ENST00000577246 CCDC195A0A1B0GUA6 201 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 LILRB3O75022 631 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 MAFO75444 373 aaPredicted RBP14.98□□□□□ -0.01
COPS3-214ENST00000577246 NR1I2O75469 434 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 C1RP00736 705 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 PUM1Q14671 1186 aaKnown RBP eCLIP14.98□□□□□ -0.01
COPS3-214ENST00000577246 PHLDB3Q6NSJ2 640 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 ZNF280BQ86YH2 543 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 CNNM3Q8NE01 707 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 HDAC7Q8WUI4 952 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 SLC7A3Q8WY07 619 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 RPS6KC1Q96S38 1066 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 HERC2P3Q9BVR0 1158 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 TBC1D17Q9HA65 648 aa14.98□□□□□ -0.01
COPS3-214ENST00000577246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.98□□□□□ -0.01
COPS3-214ENST00000577246 SPTBN4Q9H254 2564 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms