RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 GDF15Q99988 308 aa15.44■□□□□ 0.06
RPAIN-217ENST00000575711 UBE2OQ9C0C9 1292 aaKnown RBP15.44■□□□□ 0.06
RPAIN-217ENST00000575711 ERVK-5Q9HDB9 667 aa15.44■□□□□ 0.06
RPAIN-217ENST00000575711 PADI3Q9ULW8 664 aa15.44■□□□□ 0.06
RPAIN-217ENST00000575711 ST3GAL5Q9UNP4 418 aa15.44■□□□□ 0.06
RPAIN-217ENST00000575711 PHLPP2Q6ZVD8 1323 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 H0YCG3 227 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 KINO60870 393 aaKnown RBP15.43■□□□□ 0.06
RPAIN-217ENST00000575711 CSDE1O75534 798 aaKnown RBP15.43■□□□□ 0.06
RPAIN-217ENST00000575711 FGBP02675 491 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 MYL1P05976 194 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 GAP43P17677 238 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 EFNA5P52803 228 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 EPHB4P54760 987 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 PCBP1Q15365 356 aaKnown RBP eCLIP15.43■□□□□ 0.06
RPAIN-217ENST00000575711 CNNM4Q6P4Q7 775 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 FAM43BQ6ZT52 329 aaPredicted RBP15.43■□□□□ 0.06
RPAIN-217ENST00000575711 ZNF365Q70YC5 407 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 CATSPER4Q7RTX7 472 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 GRAMD1CQ8IYS0 662 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 VWCEQ96DN2 955 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 TIGD1Q96MW7 591 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 KIFC3Q9BVG8 833 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 FTHL17Q9BXU8 183 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 BLZF1Q9H2G9 400 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 LMBRD1Q9NUN5 540 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 PANK4Q9NVE7 773 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 SEL1LQ9UBV2 794 aa15.43■□□□□ 0.06
RPAIN-217ENST00000575711 HOOK1Q9UJC3 728 aaKnown RBP15.43■□□□□ 0.06
RPAIN-217ENST00000575711 FRMD3A2A2Y4 597 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 SLC16A4O15374 487 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 GTPBP6O43824 516 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-217ENST00000575711 TRAK2O60296 914 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 EFCAB14O75071 495 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 ERLIN2O94905 339 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 FGFR4P22455 802 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 MBTD1Q05BQ5 628 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 CUL4BQ13620 913 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 IKBKEQ14164 716 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 MAPK6Q16659 721 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 HERC4Q5GLZ8 1057 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-217ENST00000575711 TMEM240Q5SV17 173 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 C16orf59Q7L2K0 433 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 OTOP2Q7RTS6 562 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 SFR1Q86XK3 245 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 FAM178BQ8IXR5 827 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 SLC17A8Q8NDX2 589 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.42■□□□□ 0.066e-12■□□□□ 9.7
RPAIN-217ENST00000575711 NTPCRQ9BSD7 190 aaKnown RBP15.42■□□□□ 0.06
RPAIN-217ENST00000575711 MTIF3Q9H2K0 278 aaKnown RBP15.42■□□□□ 0.06
RPAIN-217ENST00000575711 MINDY3Q9H8M7 445 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 PRMT7Q9NVM4 692 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-217ENST00000575711 ARHGAP28Q9P2N2 729 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 ADGRA3Q8IWK6 1321 aa15.42■□□□□ 0.06
RPAIN-217ENST00000575711 SIP14410 1827 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 ABHD14A-ACY1A0A1B0GW23 586 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 K7ENM7 598 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 BAIAP3O94812 1187 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 ZSCAN20P17040 1043 aaPredicted RBP15.41■□□□□ 0.06
RPAIN-217ENST00000575711 SCP2P22307 547 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 CASP1P29466 404 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 BMP8BP34820 402 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 NCKAP1LP55160 1127 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
RPAIN-217ENST00000575711 COASYQ13057 564 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 UNC13DQ70J99 1090 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 PRIMPOLQ96LW4 560 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 TMEM134Q9H6X4 195 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 DACT1Q9NYF0 836 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 SCN5AQ14524 2016 aa15.41■□□□□ 0.06
RPAIN-217ENST00000575711 TNRC18O15417 2968 aaPredicted RBP15.4■□□□□ 0.06
RPAIN-217ENST00000575711 PVALEFA0A1B0GWK0 134 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 DENND3A2RUS2 1198 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 ZBBXA8MT70 800 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 K7ERI5 159 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 PRKCBP05771 671 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 PRR29P0C7W0 189 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 MAPTP10636 758 aaKnown RBP15.4■□□□□ 0.06
RPAIN-217ENST00000575711 ABCD1P33897 745 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 STRN3Q13033 797 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 POSTNQ15063 836 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 FAM187BQ17R55 369 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 TCTN1Q2MV58 587 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 PRPF38BQ5VTL8 546 aaKnown RBP15.4■□□□□ 0.06
RPAIN-217ENST00000575711 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 HAUS6Q7Z4H7 955 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 TMEM161BQ8NDZ6 487 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 HERVK_113Q902F9 699 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 CCDC47Q96A33 483 aaKnown RBP15.4■□□□□ 0.06
RPAIN-217ENST00000575711 CCDC113Q9H0I3 377 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 TMX1Q9H3N1 280 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 FZD8Q9H461 694 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 MRPL44Q9H9J2 332 aaKnown RBP15.4■□□□□ 0.06
RPAIN-217ENST00000575711 OLFML3Q9NRN5 406 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 AGPAT5Q9NUQ2 364 aa15.4■□□□□ 0.06
RPAIN-217ENST00000575711 PIN4Q9Y237 131 aaKnown RBP15.4■□□□□ 0.06
RPAIN-217ENST00000575711 RBAK-RBAKDNI3L0D1 243 aa15.39■□□□□ 0.05
RPAIN-217ENST00000575711 ACKR2O00590 384 aa15.39■□□□□ 0.05
RPAIN-217ENST00000575711 TSPAN1O60635 241 aa15.39■□□□□ 0.05
RPAIN-217ENST00000575711 NMT1P30419 496 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms