RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 KCTD17Q8N5Z5 321 aa22.93■■□□□ 1.26
HCFC1R1-208ENST00000575214 BSNDQ8WZ55 320 aa22.93■■□□□ 1.26
HCFC1R1-208ENST00000575214 KIFAP3Q92845 792 aa22.93■■□□□ 1.26
HCFC1R1-208ENST00000575214 CLP1Q92989 425 aaKnown RBP22.93■■□□□ 1.26
HCFC1R1-208ENST00000575214 TRAIPQ9BWF2 469 aa22.93■■□□□ 1.26
HCFC1R1-208ENST00000575214 FAM105AQ9NUU6 356 aa22.93■■□□□ 1.26
HCFC1R1-208ENST00000575214 SLC26A4O43511 780 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 LPXNO60711 386 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 EOMESO95936 686 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 LINC00271P0C7V0 271 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 ZSCAN22P10073 491 aaPredicted RBP22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 SKIP12755 728 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 BMPR1AP36894 532 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 RAB27AP51159 221 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 NCBP1Q09161 790 aaKnown RBP22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 PPP2R5AQ15172 486 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 TMEM119Q4V9L6 283 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 SPOUT1Q5T280 376 aaKnown RBP22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 ZBTB8OSQ8IWT0 167 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 IFT74Q96LB3 600 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 RUSC1Q9BVN2 902 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 TMEM117Q9H0C3 514 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 CSRNP2Q9H175 543 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 FBXO2Q9UK22 296 aaPredicted RBP22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 MTCH2Q9Y6C9 303 aa22.92■■□□□ 1.26
HCFC1R1-208ENST00000575214 TSPAN1O60635 241 aa22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 ATF7P17544 494 aaPredicted RBP22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 HOXA11P31270 313 aaPredicted RBP22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 NAMPTP43490 491 aa22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 GPM6BQ13491 265 aa22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 CCDC85BQ15834 202 aaPredicted RBP22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 RINT1Q6NUQ1 792 aa22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 ZNF598Q86UK7 904 aaKnown RBP22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 DEPTORQ8TB45 409 aa22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 ZNF396Q96N95 335 aaPredicted RBP22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 C2orf40Q9H1Z8 148 aa22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 RNF19AQ9NV58 838 aa22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 SRPRBQ9Y5M8 271 aaKnown RBP22.91■■□□□ 1.26
HCFC1R1-208ENST00000575214 COL4A4P53420 1690 aaPredicted RBP22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 F13A1P00488 732 aa22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 PLA2G4BP0C869 781 aa22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 POU3F3P20264 500 aaPredicted RBP22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 AXLP30530 894 aa22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 SLC39A14Q15043 492 aa22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 KARSQ15046 597 aaKnown RBP22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 STK38Q15208 465 aa22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 LONRF3Q496Y0 759 aa22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 SPECC1Q5M775 1068 aa22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 CDCA2Q69YH5 1023 aaPredicted RBP22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 NOTUMQ6P988 496 aa22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 CPB2Q96IY4 423 aa22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 C11orf84Q9BUA3 381 aaPredicted RBP22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 A0A0C4DFX4 3053 aa22.9■■□□□ 1.26
HCFC1R1-208ENST00000575214 H3BNC9 293 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 HIP1RO75146 1068 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 RB1P06400 928 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 NASPP49321 788 aaPredicted RBP22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 PKP1Q13835 747 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 AMHR2Q16671 573 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 FOXD4L6Q3SYB3 417 aaPredicted RBP22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 CLLU1OSQ5K130 101 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 FOXD4L3Q6VB84 417 aaPredicted RBP22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 C1orf186Q6ZWK4 172 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 SYT2Q8N9I0 419 aaPredicted RBP22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 HELQQ8TDG4 1101 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 LPPQ93052 612 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 CLIC6Q96NY7 704 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 CASD1Q96PB1 797 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 PRMT7Q9NVM4 692 aaPredicted RBP22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 PCDHB2Q9Y5E7 798 aa22.89■■□□□ 1.26
HCFC1R1-208ENST00000575214 C5orf67F2Z3F1 127 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 LIG1P18858 919 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 PLCG1P19174 1290 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 SLC12A3P55017 1021 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 KRI1Q8N9T8 703 aaKnown RBP22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 PGBD4Q96DM1 585 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 CCDC51Q96ER9 411 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 EPSTI1Q96J88 318 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 DRC1Q96MC2 740 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 KIFC3Q9BVG8 833 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 PLVAPQ9BX97 442 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 CCSER1Q9C0I3 900 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 TYW1Q9NV66 732 aaKnown RBP22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 TFIP11Q9UBB9 837 aaKnown RBP22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 HCSTQ9UBK5 93 aa22.89■■□□□ 1.25
HCFC1R1-208ENST00000575214 B4GALT5O43286 388 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 ZNF623O75123 536 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 ARF4P18085 180 aaPredicted RBP22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 RAD51AP2Q09MP3 1159 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 BECN1Q14457 450 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 PTPROQ16827 1216 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 UBXN11Q5T124 520 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 LRRC43Q8N309 656 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 SYMPKQ92797 1274 aaKnown RBP22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 PRIMPOLQ96LW4 560 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 TIPINQ9BVW5 301 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 AAASQ9NRG9 546 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 LMCD1Q9NZU5 365 aa22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 MORC2Q9Y6X9 1032 aaPredicted RBP22.88■■□□□ 1.25
HCFC1R1-208ENST00000575214 RALGAPA2Q2PPJ7 1873 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms