RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 EPHA7Q15375 998 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 GPBP1Q86WP2 473 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 MARCH10Q8NA82 808 aaPredicted RBP15.52■□□□□ 0.07
SMG6-215ENST00000574501 TTC8Q8TAM2 541 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 CTNNBL1Q8WYA6 563 aaPredicted RBP15.52■□□□□ 0.07
SMG6-215ENST00000574501 KRT35Q92764 455 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 COA7Q96BR5 231 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 THAP2Q9H0W7 228 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 DNAJC17Q9NVM6 304 aaKnown RBP15.52■□□□□ 0.07
SMG6-215ENST00000574501 TAS2R14Q9NYV8 317 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 ANKIB1Q9P2G1 1089 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 INTUQ9ULD6 942 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 TMEM110-MUSTN1A8MSY1 372 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 MARCH6O60337 910 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 KRT18P05783 430 aaKnown RBP15.51■□□□□ 0.07
SMG6-215ENST00000574501 PTDSS1P48651 473 aaKnown RBP15.51■□□□□ 0.07
SMG6-215ENST00000574501 LLGL1Q15334 1064 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 VSIG1Q86XK7 387 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 ZNF444Q8N0Y2 327 aaPredicted RBP15.51■□□□□ 0.07
SMG6-215ENST00000574501 FAM13CQ8NE31 585 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 ERP27Q96DN0 273 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 POP1Q99575 1024 aaKnown RBP15.51■□□□□ 0.07
SMG6-215ENST00000574501 CDC42EP4Q9H3Q1 356 aaKnown RBP15.51■□□□□ 0.07
SMG6-215ENST00000574501 PRDM11Q9NQV5 511 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 TBK1Q9UHD2 729 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 COG5Q9UP83 839 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 PCDHA3Q9Y5H8 950 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 NHSL1Q5SYE7 1610 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 ERVV-1B6SEH8 477 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 TOM1O60784 492 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 AKAP3O75969 853 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 BRAFP15056 766 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 TNNI2P48788 182 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 C12orf60Q5U649 245 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 SPTY2D1Q68D10 685 aaPredicted RBP15.51■□□□□ 0.07
SMG6-215ENST00000574501 INTS8Q75QN2 995 aaKnown RBP15.51■□□□□ 0.07
SMG6-215ENST00000574501 CCDC105Q8IYK2 499 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 GALNT15Q8N3T1 639 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 ANKRD27Q96NW4 1050 aa15.51■□□□□ 0.07
SMG6-215ENST00000574501 DIS3Q9Y2L1 958 aaKnown RBP15.51■□□□□ 0.07
SMG6-215ENST00000574501 ANKRD36CQ5JPF3 1778 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 GPR75-ASB3A0A0A6YYF3 556 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 TCRBV7S2A1N4TA0A589 114 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 NPTXRO95502 500 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 PLA2G4BP0C869 781 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 CHRNA3P32297 505 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 SKIV2L2P42285 1042 aaKnown RBP15.5■□□□□ 0.07
SMG6-215ENST00000574501 CASP4P49662 377 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 SESN3P58005 492 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 KLC1Q07866 573 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 SLC5A9Q2M3M2 681 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 RNF43Q68DV7 783 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 SLC30A5Q8TAD4 765 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 OLIG1Q8TAK6 271 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 UCMAQ8WVF2 138 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 PAIP2Q9BPZ3 127 aaKnown RBP15.5■□□□□ 0.07
SMG6-215ENST00000574501 SPZ1Q9BXG8 430 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 TXLNGQ9NUQ3 528 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 CHORDC1Q9UHD1 332 aaPredicted RBP15.5■□□□□ 0.07
SMG6-215ENST00000574501 ASB3Q9Y575 518 aa15.5■□□□□ 0.07
SMG6-215ENST00000574501 POTEB3A0JP26 581 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 POTECB2RU33 542 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 ENTPD5O75356 428 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 TMEM253P0C7T8 217 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 SP100P23497 879 aaPredicted RBP15.49■□□□□ 0.07
SMG6-215ENST00000574501 ALDH3A1P30838 453 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 STAT1P42224 750 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 GCLCP48506 637 aaPredicted RBP15.49■□□□□ 0.07
SMG6-215ENST00000574501 POLE2P56282 527 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 ZNF449Q6P9G9 518 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 POTEBQ6S5H4 581 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 FRMD5Q7Z6J6 570 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 PALB2Q86YC2 1186 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 KSR1Q8IVT5 923 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 LBHD1Q9BQE6 289 aaPredicted RBP15.49■□□□□ 0.07
SMG6-215ENST00000574501 PITPNM3Q9BZ71 974 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 ROPN1BQ9BZX4 212 aaPredicted RBP15.49■□□□□ 0.07
SMG6-215ENST00000574501 ROPN1Q9HAT0 212 aaPredicted RBP15.49■□□□□ 0.07
SMG6-215ENST00000574501 PARP2Q9UGN5 583 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 ALG6Q9Y672 507 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 ATAD5Q96QE3 1844 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 UBAP1LF5GYI3 381 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 PODXLO00592 558 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 EPHB2P29323 1055 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 LAMB3Q13751 1172 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 CTTNQ14247 550 aaKnown RBP15.49■□□□□ 0.07
SMG6-215ENST00000574501 RRP1BQ14684 758 aaKnown RBP15.49■□□□□ 0.07
SMG6-215ENST00000574501 EDRF1Q3B7T1 1238 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 ZC3H3Q8IXZ2 948 aaKnown RBP15.49■□□□□ 0.07
SMG6-215ENST00000574501 CYP4X1Q8N118 509 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 PHC3Q8NDX5 983 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 ASAP3Q8TDY4 903 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 DNAJC9Q8WXX5 260 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 HAS1Q92839 578 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 ART4Q93070 314 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 LZTS2Q9BRK4 669 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 KIAA1683Q9H0B3 1180 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 USP40Q9NVE5 1235 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 TFCP2L1Q9NZI6 479 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms