RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ACCSQ96QU6 501 aa26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 TRIP12Q14669 1992 aaPredicted RBP26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 H0YCG3 227 aa26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 ASAP2O43150 1006 aa26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 TFDP1Q14186 410 aa26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 TAS1R3Q7RTX0 852 aa26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 SESTD1Q86VW0 696 aa26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 SYCP3Q8IZU3 236 aa26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 EEF2KMTQ96G04 330 aa26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 TSG101Q99816 390 aa26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 SAMSN1Q9NSI8 373 aaKnown RBP26.43■■□□□ 1.82
ATPAF1-213ENST00000574428 TGFB1I1O43294 461 aa26.42■■□□□ 1.82
ATPAF1-213ENST00000574428 LRRC63Q05C16 580 aa26.42■■□□□ 1.82
ATPAF1-213ENST00000574428 TMEM62Q0P6H9 643 aa26.42■■□□□ 1.82
ATPAF1-213ENST00000574428 CDCA2Q69YH5 1023 aaPredicted RBP26.42■■□□□ 1.82
ATPAF1-213ENST00000574428 DNAJB3Q8WWF6 145 aa26.42■■□□□ 1.82
ATPAF1-213ENST00000574428 HVCN1Q96D96 273 aa26.42■■□□□ 1.82
ATPAF1-213ENST00000574428 STARD7Q9NQZ5 370 aa26.42■■□□□ 1.82
ATPAF1-213ENST00000574428 CSGALNACT2Q8N6G5 542 aa26.41■■□□□ 1.82
ATPAF1-213ENST00000574428 TYW1Q9NV66 732 aaKnown RBP26.41■■□□□ 1.82
ATPAF1-213ENST00000574428 MAP4K3Q8IVH8 894 aa26.41■■□□□ 1.82
ATPAF1-213ENST00000574428 U2AF1L4Q8WU68 220 aaKnown RBP26.41■■□□□ 1.82
ATPAF1-213ENST00000574428 TMEM206Q9H813 350 aa26.41■■□□□ 1.82
ATPAF1-213ENST00000574428 DNAH12Q6ZR08 3092 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 SIP14410 1827 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 A0A087WZ62 844 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 K7ERI5 159 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 PDXKO00764 312 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 NLRP11P59045 1033 aaKnown RBP26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 TPM4P67936 248 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 UVSSAQ2YD98 709 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 ZBTB8OSQ8IWT0 167 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 NLRP7Q8WX94 980 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 SCLT1Q96NL6 688 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 FDXACB1Q9BRP7 624 aaPredicted RBP26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 SRRTQ9BXP5 876 aaKnown RBP26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 GBP3Q9H0R5 595 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 PHLPP2Q6ZVD8 1323 aa26.4■■□□□ 1.82
ATPAF1-213ENST00000574428 TISP43B9A030 160 aa26.39■■□□□ 1.82
ATPAF1-213ENST00000574428 GPC3P51654 580 aa26.39■■□□□ 1.82
ATPAF1-213ENST00000574428 KIZQ2M2Z5 673 aa26.39■■□□□ 1.82
ATPAF1-213ENST00000574428 CTAGE1Q96RT6 745 aa26.39■■□□□ 1.82
ATPAF1-213ENST00000574428 CRISPLD2Q9H0B8 497 aa26.39■■□□□ 1.82
ATPAF1-213ENST00000574428 IFT122Q9HBG6 1241 aa26.39■■□□□ 1.82
ATPAF1-213ENST00000574428 TRAF3IP3Q9Y228 551 aa26.39■■□□□ 1.82
ATPAF1-213ENST00000574428 USP20Q9Y2K6 914 aa26.39■■□□□ 1.82
ATPAF1-213ENST00000574428 CALUO43852 315 aaPredicted RBP26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 SGPL1O95470 568 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 TFRCP02786 760 aaKnown RBP26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 ATP1A3P13637 1013 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 PHKA2P46019 1235 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 EFNA5P52803 228 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 PTENP60484 403 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 STRN3Q13033 797 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 PTGISQ16647 500 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 FOXR2Q6PJQ5 311 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 PPP4R3CPQ6ZMV5 832 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 CCDC113Q9H0I3 377 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 C2orf40Q9H1Z8 148 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 TMEM134Q9H6X4 195 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 TRMT13Q9NUP7 481 aaKnown RBP26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 EXOC7Q9UPT5 735 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 A0A0U1RQG5 324 aaPredicted RBP26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 CLIC2O15247 247 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 ZNF18P17022 549 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 SCP2P22307 547 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 ABCD1P33897 745 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 EDRF1Q3B7T1 1238 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 CDKAL1Q5VV42 579 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 TAF2Q6P1X5 1199 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 LRRC55Q6ZSA7 311 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 HS2ST1Q7LGA3 356 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 SERINC5Q86VE9 423 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 KCNN1Q92952 543 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 WNT8BQ93098 351 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 MINDY3Q9H8M7 445 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 PRDM10Q9NQV6 1147 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 AGPAT3Q9NRZ7 376 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 GINS2Q9Y248 185 aa26.38■■□□□ 1.81
ATPAF1-213ENST00000574428 CSDE1O75534 798 aaKnown RBP26.37■■□□□ 1.81
ATPAF1-213ENST00000574428 EDN1P05305 212 aa26.37■■□□□ 1.81
ATPAF1-213ENST00000574428 PLCB2Q00722 1185 aa26.37■■□□□ 1.81
ATPAF1-213ENST00000574428 PTPN11Q06124 597 aaPredicted RBP26.37■■□□□ 1.81
ATPAF1-213ENST00000574428 BICD1Q96G01 975 aa26.37■■□□□ 1.81
ATPAF1-213ENST00000574428 ADAMTS10Q9H324 1103 aa26.37■■□□□ 1.81
ATPAF1-213ENST00000574428 INO80B-WBP1J3KQ70 363 aa26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 GPR32O75388 356 aa26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 NR3C1P04150 777 aa26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 NR2F2P24468 414 aa26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 FKBP3Q00688 224 aaKnown RBP26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 MBTD1Q05BQ5 628 aa26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 POU5F1BQ06416 359 aa26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 ZNF410Q86VK4 478 aa26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 IRF2BP1Q8IU81 584 aa26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 SLC43A3Q8NBI5 491 aa26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 NFKBIZQ9BYH8 718 aa26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 INO80BQ9C086 356 aaPredicted RBP26.36■■□□□ 1.81
ATPAF1-213ENST00000574428 ANKRD63C9JTQ0 380 aa26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 HNRNPDLO14979 420 aaKnown RBP26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 AP5Z1O43299 807 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms