RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 NGRNQ9NPE2 291 aaKnown RBP23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 INPP5FQ9Y2H2 1132 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 PPME1Q9Y570 386 aa23.63■■□□□ 1.37
CHRNB1-206ENST00000574054 HIDE1A8MVS5 230 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 JAK2O60674 1132 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 CA8P35219 290 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 ALDH7A1P49419 539 aaKnown RBP23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 BCAR1P56945 870 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 TRIM29Q14134 588 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 XKR9Q5GH70 373 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 GLB1LQ6UWU2 654 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 OTUD6AQ7L8S5 288 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 C4orf19Q8IY42 314 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 SLC39A11Q8N1S5 342 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 NSUN7Q8NE18 718 aaKnown RBP23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 DHX33Q9H6R0 707 aaKnown RBP23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 ZSWIM4Q9H7M6 989 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 FAM105AQ9NUU6 356 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 MUTYHQ9UIF7 546 aa23.62■■□□□ 1.37
CHRNB1-206ENST00000574054 NT5C1B-RDH14C9J2C7 533 aa23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 ZC3H11AO75152 810 aaKnown RBP eCLIP23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 SPIRE1Q08AE8 756 aa23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 LAMTOR4Q0VGL1 99 aa23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 EMC2Q15006 297 aa23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 CALCRLQ16602 461 aa23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 RNF135Q8IUD6 432 aa23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 TPH2Q8IWU9 490 aa23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 TNFRSF25Q93038 417 aa23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 TRAIPQ9BWF2 469 aa23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 IFT122Q9HBG6 1241 aa23.61■■□□□ 1.37
CHRNB1-206ENST00000574054 ZBTB39O15060 712 aa23.6■■□□□ 1.37
CHRNB1-206ENST00000574054 EIF5BO60841 1220 aaKnown RBP23.6■■□□□ 1.37
CHRNB1-206ENST00000574054 TECP42680 631 aa23.6■■□□□ 1.37
CHRNB1-206ENST00000574054 RAB27AP51159 221 aa23.6■■□□□ 1.37
CHRNB1-206ENST00000574054 SMC1AQ14683 1233 aaKnown RBP23.6■■□□□ 1.37
CHRNB1-206ENST00000574054 DIS3L2Q8IYB7 885 aaKnown RBP23.6■■□□□ 1.37
CHRNB1-206ENST00000574054 TMEM169Q96HH4 297 aa23.6■■□□□ 1.37
CHRNB1-206ENST00000574054 APOL5Q9BWW9 433 aa23.6■■□□□ 1.37
CHRNB1-206ENST00000574054 AGPAT5Q9NUQ2 364 aa23.6■■□□□ 1.37
CHRNB1-206ENST00000574054 MEIS3P2A8K0S8 358 aa23.59■■□□□ 1.37
CHRNB1-206ENST00000574054 BTBD18B2RXH4 712 aa23.59■■□□□ 1.37
CHRNB1-206ENST00000574054 GAS2O43903 313 aaKnown RBP23.59■■□□□ 1.37
CHRNB1-206ENST00000574054 RNASELQ05823 741 aaKnown RBP23.59■■□□□ 1.37
CHRNB1-206ENST00000574054 NOMO2Q5JPE7 1267 aa23.59■■□□□ 1.37
CHRNB1-206ENST00000574054 SRGAP1Q7Z6B7 1085 aa23.59■■□□□ 1.37
CHRNB1-206ENST00000574054 TCP11Q8WWU5 503 aa23.59■■□□□ 1.37
CHRNB1-206ENST00000574054 EIF2AK1Q9BQI3 630 aaKnown RBP23.59■■□□□ 1.37
CHRNB1-206ENST00000574054 GBP3Q9H0R5 595 aa23.59■■□□□ 1.37
CHRNB1-206ENST00000574054 MINDY3Q9H8M7 445 aa23.59■■□□□ 1.37
CHRNB1-206ENST00000574054 BMS1Q14692 1282 aaKnown RBP23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 HERC4Q5GLZ8 1057 aaPredicted RBP23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 ANKRD54Q6NXT1 300 aa23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 RNF149Q8NC42 400 aa23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 RSPH1Q8WYR4 309 aa23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 PGBD4Q96DM1 585 aa23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 CCDC43Q96MW1 224 aaKnown RBP23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 MTRQ99707 1265 aa23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 PHF7Q9BWX1 381 aaPredicted RBP23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 TBC1D13Q9NVG8 400 aa23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 PCDHA12Q9UN75 941 aa23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 PCDHB2Q9Y5E7 798 aa23.58■■□□□ 1.37
CHRNB1-206ENST00000574054 NEMFO60524 1076 aa23.57■■□□□ 1.36
CHRNB1-206ENST00000574054 FERMT3Q86UX7 667 aa23.57■■□□□ 1.36
CHRNB1-206ENST00000574054 MRPL43Q8N983 215 aaKnown RBP23.57■■□□□ 1.36
CHRNB1-206ENST00000574054 URGCPQ8TCY9 931 aa23.57■■□□□ 1.36
CHRNB1-206ENST00000574054 RPGRIP1Q96KN7 1286 aa23.57■■□□□ 1.36
CHRNB1-206ENST00000574054 TTC12Q9H892 705 aaPredicted RBP23.57■■□□□ 1.36
CHRNB1-206ENST00000574054 C2orf71A6NGG8 1288 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 LOC730098B7Z3J9 87 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 WNT7AO00755 349 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 ZNF623O75123 536 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 OFD1O75665 1012 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 SLITRK3O94933 977 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 CXCL14O95715 111 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 TXKP42681 527 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 KCNC3Q14003 757 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 TMEM184AQ6ZMB5 413 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 TMEM173Q86WV6 379 aaPredicted RBP23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 VPS52Q8N1B4 723 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 TMEM87AQ8NBN3 555 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 SUSD6Q92537 303 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 NRDE2Q9H7Z3 1164 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 ARIH1Q9Y4X5 557 aaPredicted RBP23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 MUC6Q6W4X9 2439 aa23.56■■□□□ 1.36
CHRNB1-206ENST00000574054 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.55■■□□□ 1.36
CHRNB1-206ENST00000574054 ASAP2O43150 1006 aa23.55■■□□□ 1.36
CHRNB1-206ENST00000574054 ERLIN2O94905 339 aa23.55■■□□□ 1.36
CHRNB1-206ENST00000574054 SEC24BO95487 1268 aa23.55■■□□□ 1.36
CHRNB1-206ENST00000574054 ATP2B1P20020 1258 aa23.55■■□□□ 1.36
CHRNB1-206ENST00000574054 GUCY1B3Q02153 619 aa23.55■■□□□ 1.36
CHRNB1-206ENST00000574054 SYCE2Q6PIF2 218 aa23.55■■□□□ 1.36
CHRNB1-206ENST00000574054 CASP10Q92851 521 aa23.55■■□□□ 1.36
CHRNB1-206ENST00000574054 S1PR5Q9H228 398 aa23.55■■□□□ 1.36
CHRNB1-206ENST00000574054 CARNS1A5YM72 827 aa23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 GALTP07902 379 aa23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 HOXA11P31270 313 aaPredicted RBP23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 SLC11A1P49279 550 aa23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 CBX2Q14781 532 aaPredicted RBP23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 AGMOQ6ZNB7 445 aa23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 AUTS2Q8WXX7 1259 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms