RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 PNPLA8Q9NP80 782 aa2.5□□□□□ -2.01
CHD3-217ENST00000574022 NOP53Q9NZM5 478 aaKnown RBP2.5□□□□□ -2.01
CHD3-217ENST00000574022 TNFRSF10DQ9UBN6 386 aa2.5□□□□□ -2.01
CHD3-217ENST00000574022 PRSS50Q9UI38 385 aa2.5□□□□□ -2.01
CHD3-217ENST00000574022 MKL2Q9ULH7 1088 aa2.5□□□□□ -2.01
CHD3-217ENST00000574022 USP18Q9UMW8 372 aa2.5□□□□□ -2.01
CHD3-217ENST00000574022 TELO2Q9Y4R8 837 aa2.5□□□□□ -2.01
CHD3-217ENST00000574022 ASB1Q9Y576 335 aa2.5□□□□□ -2.01
CHD3-217ENST00000574022 PCDHGB2Q9Y5G2 931 aa2.5□□□□□ -2.01
CHD3-217ENST00000574022 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 A0A1W2PPL8 197 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 A0A1W2PQJ5 194 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 FAM170BA6NMN3 283 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 FADS2P1A8MWK0 482 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 H3BUI4 141 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 hCG_1984214I3L0E3 225 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 CCER2I3L3R5 266 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 ACOT7O00154 380 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 DDX3XO00571 662 aaKnown RBP eCLIP2.49□□□□□ -2.01
CHD3-217ENST00000574022 TCERG1O14776 1098 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 APOL1O14791 398 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 NCAM2O15394 837 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PHGDHO43175 533 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 SNX2O60749 519 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PCDH8O95206 1070 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 IL18RAPO95256 599 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 CNOT4O95628 575 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 ESR1P03372 595 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 THP07101 528 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PFKMP08237 780 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PARP1P09874 1014 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 DHRS4L1P0CG22 281 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 SPATA31C1P0DKV0 1188 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 MCAMP43121 646 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 CLCN7P51798 805 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 EIF5P55010 431 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 OXCT1P55809 520 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 CORO7P57737 925 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 RAB1AP62820 205 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 FMO1Q01740 532 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 ROM1Q03395 351 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 GRIN1Q05586 938 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PPARAQ07869 468 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PDE1CQ14123 709 aaPredicted RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 MYBPC3Q14896 1274 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 NR0B2Q15466 257 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 ADRM1Q16186 407 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 CNGA2Q16280 664 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 TAF12Q16514 161 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 ARL13BQ3SXY8 428 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 INTS11Q5TA45 600 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 SLFN12LQ6IEE8 588 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 CFAP161Q6P656 301 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 FAM180AQ6UWF9 173 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 BTNL9Q6UXG8 535 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 CYP26C1Q6V0L0 522 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 ZNF765Q7L2R6 523 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 KANSL1Q7Z3B3 1105 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 RTN4RL1Q86UN2 441 aaPredicted RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 LIX1LQ8IVB5 337 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 SUGP1Q8IWZ8 645 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 SPACA3Q8IXA5 215 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 FBXL6Q8N531 539 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 MSL3Q8N5Y2 521 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 FAM181AQ8N9Y4 354 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 C3orf20Q8ND61 904 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 IL31RAQ8NI17 732 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 GAB3Q8WWW8 586 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 ANKS1AQ92625 1134 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 MTFMTQ96DP5 389 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 ZC3H10Q96K80 434 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 UBXN10Q96LJ8 280 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 ZSCAN31Q96LW9 406 aaPredicted RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 NACC1Q96RE7 527 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 JMJD8Q96S16 334 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 TTLL2Q9BWV7 592 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PDGFDQ9GZP0 370 aaPredicted RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 GREM2Q9H772 168 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 C14orf93Q9H972 538 aaKnown RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 ATP6V0A4Q9HBG4 840 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 MKNK2Q9HBH9 465 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 ITM2CQ9NQX7 267 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 SEMA3GQ9NS98 782 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PDP2Q9P2J9 529 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 MYOTQ9UBF9 498 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 ASH2LQ9UBL3 628 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 STAP2Q9UGK3 403 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 EVLQ9UI08 416 aaPredicted RBP2.49□□□□□ -2.01
CHD3-217ENST00000574022 OGDHLQ9ULD0 1010 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PCDHB4Q9Y5E5 795 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PCDHB1Q9Y5F3 818 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 PCDHA13Q9Y5I0 950 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 CDY2AQ9Y6F7 541 aa2.49□□□□□ -2.01
CHD3-217ENST00000574022 USP19O94966 1318 aa2.48□□□□□ -2.01
CHD3-217ENST00000574022 ITIH6Q6UXX5 1313 aa2.48□□□□□ -2.01
CHD3-217ENST00000574022 HMX2A2RU54 273 aa2.48□□□□□ -2.01
CHD3-217ENST00000574022 LRRC14BA6NHZ5 514 aa2.48□□□□□ -2.01
CHD3-217ENST00000574022 RRN3P2A6NIE6 340 aa2.48□□□□□ -2.01
CHD3-217ENST00000574022 PRSS47A8MTI9 375 aa2.48□□□□□ -2.01
CHD3-217ENST00000574022 ISM1B1AKI9 464 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms