RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CSDE1O75534 798 aaKnown RBP14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 FAM13AO94988 1023 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 UPP2O95045 317 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 GJB5O95377 273 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 FGFR4P22455 802 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 CMA1P23946 247 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 SARSP49591 514 aaKnown RBP14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 DEFB103AP81534 67 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 RAD51AP2Q09MP3 1159 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 MAPK6Q16659 721 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 CDCA2Q69YH5 1023 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 TWF2Q6IBS0 349 aaKnown RBP14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 PRIMPOLQ96LW4 560 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 IPO9Q96P70 1041 aaKnown RBP14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 RAD9AQ99638 391 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 TMX1Q9H3N1 280 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 PRMT7Q9NVM4 692 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 INSL6Q9Y581 213 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 PCDHB7Q9Y5E2 793 aa14.1□□□□□ -0.15
TRAPPC1-206ENST00000573989 TMEM265A0A087WTH1 108 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 POLR2DO15514 142 aaKnown RBP14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 PLS3P13797 630 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 SCP2P22307 547 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 DNAJB2P25686 324 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 ABCD1P33897 745 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 RAB27AP51159 221 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 PEX3P56589 373 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 MBTD1Q05BQ5 628 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 DSC3Q14574 896 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 TMEM132AQ24JP5 1023 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 NAALADL2Q58DX5 795 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 NOTUMQ6P988 496 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 NPAS4Q8IUM7 802 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 CEP57L1Q8IYX8 460 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 SLC17A8Q8NDX2 589 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 DHX58Q96C10 678 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 CCDC51Q96ER9 411 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 YME1L1Q96TA2 773 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 REEP2Q9BRK0 252 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 PBX4Q9BYU1 374 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 TNMDQ9H2S6 317 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 MINDY3Q9H8M7 445 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 PARVGQ9HBI0 331 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 KMT5AQ9NQR1 393 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 TSHZ2Q9NRE2 1034 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 AGPAT5Q9NUQ2 364 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 KCNH3Q9ULD8 1083 aa14.09□□□□□ -0.15
TRAPPC1-206ENST00000573989 A0A1W2PQ27 194 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 A0A1W2PQ64 194 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 A0A1W2PQD8 194 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 GRXCR1A8MXD5 290 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 K7ERI5 159 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 HOXA2O43364 376 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 NPTX2P47972 431 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 FAM187BQ17R55 369 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 ARSHQ5FYA8 562 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 ZNF697Q5TEC3 545 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 FAM109BQ6ICB4 259 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 FAM117BQ6P1L5 589 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 APBB1IPQ7Z5R6 666 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 RTN4RL1Q86UN2 441 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 DAW1Q8N136 415 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 MYCT1Q8N699 235 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 SPIRE2Q8WWL2 714 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 BSNDQ8WZ55 320 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 DDX12PQ92771 950 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 TIFAQ96CG3 184 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 CCDC34Q96HJ3 373 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 NTPCRQ9BSD7 190 aaKnown RBP14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 TRAIPQ9BWF2 469 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 ZHX3Q9H4I2 956 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 ELAC1Q9H777 363 aaKnown RBP14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 POLD4Q9HCU8 107 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 USP25Q9UHP3 1055 aa14.08□□□□□ -0.16
TRAPPC1-206ENST00000573989 A0A087X0B3 334 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 A0A0U1RQF3 1178 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 SFI1A8K8P3 1242 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 C9IYK1 514 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 SOX1O00570 391 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 MGEA5O60502 916 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 EOMESO95936 686 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 PRKCBP05771 671 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 IBSPP21815 317 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 FXR1P51114 621 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 RABGGTBP53611 331 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 STRN3Q13033 797 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 MAPK7Q13164 816 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 PRPF4BQ13523 1007 aaKnown RBP14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 GIT2Q14161 759 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 E2F4Q16254 413 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 HACE1Q8IYU2 909 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 CNNM3Q8NE01 707 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 LRRC15Q8TF66 581 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 LINC01599Q8WXQ3 324 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 RSPH1Q8WYR4 309 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 MRPS27Q92552 414 aaKnown RBP14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 LRCH3Q96II8 777 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 CHAMP1Q96JM3 812 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms