RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 TMEM266Q2M3C6 531 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 CEP55Q53EZ4 464 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 MTHFD1LQ6UB35 978 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 TMTC3Q6ZXV5 915 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 RBM23Q86U06 439 aaKnown RBP6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 GLYCTKQ8IVS8 523 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 SUGP1Q8IWZ8 645 aaKnown RBP6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 TPCN2Q8NHX9 752 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 CYP2W1Q8TAV3 490 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 TMEM40Q8WWA1 233 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 ASIC4Q96FT7 647 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 CDCA3Q99618 268 aaPredicted RBP6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 SPSB2Q99619 263 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 PRRX2Q99811 253 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 MXRA8Q9BRK3 442 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 SDF4Q9BRK5 362 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 TLE6Q9H808 572 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 ERVK-5Q9HDB9 667 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 PRDM9Q9NQV7 894 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 TLR9Q9NR96 1032 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 AAASQ9NRG9 546 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 C1orf112Q9NSG2 853 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 DCTN4Q9UJW0 460 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 PCDHB12Q9Y5F1 795 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 CACNA1AO00555 2505 aa6.86□□□□□ -1.31
CACNA1A-203ENST00000573891 COL1A2P08123 1366 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 CCDC69A6NI79 296 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 TBKBP1A7MCY6 615 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 ZBTB42B2RXF5 422 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 MEIS1O00470 390 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 FSCN2O14926 492 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 PER2O15055 1255 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 HRO43593 1189 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 HBP1O60381 514 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 PPFIA3O75145 1194 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 RPS6KA5O75582 802 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 FGF18O76093 207 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 RECKO95980 971 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 CCNE2O96020 404 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 ARP10275 920 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 MAPK1P28482 360 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 ERVFC1P60507 584 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 NFX1Q12986 1120 aaKnown RBP6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 MMRN1Q13201 1228 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 PTPN21Q16825 1174 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 FAM102BQ5T8I3 360 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 WWC2Q6AWC2 1192 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 PDE12Q6L8Q7 609 aaKnown RBP6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 PPP1R18Q6NYC8 613 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 TMEM184AQ6ZMB5 413 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 NFXL1Q6ZNB6 911 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 SLC24A5Q71RS6 500 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 HEATR3Q7Z4Q2 680 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 SGMS1Q86VZ5 419 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 KIAA0319LQ8IZA0 1049 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 FANCBQ8NB91 859 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 COLGALT1Q8NBJ5 622 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 RASGRP4Q8TDF6 673 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 MICAL1Q8TDZ2 1067 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 RPGRIP1Q96KN7 1286 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 SNX27Q96L92 541 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 ADAM2Q99965 735 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 S1PR5Q9H228 398 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 AGO4Q9HCK5 861 aaKnown RBP6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 RIC8AQ9NPQ8 531 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 RGS18Q9NS28 235 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 HCSTQ9UBK5 93 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 SEPT3Q9UH03 358 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 FEZ2Q9UHY8 353 aaPredicted RBP6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 TSR3Q9UJK0 312 aaKnown RBP6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 LRFN2Q9ULH4 789 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 GINS2Q9Y248 185 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 LZTS1Q9Y250 596 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 NOC2LQ9Y3T9 749 aaKnown RBP6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 NUB1Q9Y5A7 615 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 PCDHB7Q9Y5E2 793 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 SLC12A7Q9Y666 1083 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 DNMT3AQ9Y6K1 912 aaPredicted RBP6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 CFAP54Q96N23 3096 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 KIAA1671Q9BY89 1806 aa6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 EP300Q09472 2414 aaPredicted RBP6.85□□□□□ -1.31
CACNA1A-203ENST00000573891 CNTNAP5Q8WYK1 1306 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 DENND3A2RUS2 1198 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 GPR182O15218 404 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 C22orf31O95567 290 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 FOSP01100 380 aaPredicted RBP6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 LAG3P18627 525 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 KLRC1P26715 233 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 WEE1P30291 646 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 SREBF1P36956 1147 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 CRYBB1P53674 252 aaPredicted RBP6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 NAPAP54920 295 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 VCPP55072 806 aaKnown RBP6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 FAM189BP81408 668 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 PLCB3Q01970 1234 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 AP3B2Q13367 1082 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 DSC3Q14574 896 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 ZNF484Q5JVG2 852 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 ODR4Q5SWX8 454 aa6.84□□□□□ -1.31
CACNA1A-203ENST00000573891 FAM160B1Q5W0V3 765 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms