RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 TCP11Q8WWU5 503 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 PSPC1Q8WXF1 523 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 CLP1Q92989 425 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 TMEM143Q96AN5 459 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 MRPL38Q96DV4 380 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 MTRQ99707 1265 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 HSD17B14Q9BPX1 270 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 C11orf84Q9BUA3 381 aaPredicted RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 DHX33Q9H6R0 707 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 ATP6V0A4Q9HBG4 840 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 ANKEF1Q9NU02 776 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 TMEM161AQ9NX61 479 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 COL4A3BPQ9Y5P4 624 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 MRPL42Q9Y6G3 142 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 TBKBP1A7MCY6 615 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 C5orf67F2Z3F1 127 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 H3BQV1 296 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 LYPLA2O95372 231 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 BRD1O95696 1058 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 FGFR1P11362 822 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 SFPQP23246 707 aaKnown RBP eCLIP10.11□□□□□ -0.79
NDE1-207ENST00000573203 FAM189BP81408 668 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 MRPS5P82675 430 aaKnown RBP10.11□□□□□ -0.79
NDE1-207ENST00000573203 EMC2Q15006 297 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 FAM102BQ5T8I3 360 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 CATSPER4Q7RTX7 472 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 KSR1Q8IVT5 923 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 ZNF454Q8N9F8 522 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 ERMNQ8TAM6 284 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 PRPF31Q8WWY3 499 aaKnown RBP10.11□□□□□ -0.79
NDE1-207ENST00000573203 SYMPKQ92797 1274 aaKnown RBP10.11□□□□□ -0.79
NDE1-207ENST00000573203 ELAC1Q9H777 363 aaKnown RBP10.11□□□□□ -0.79
NDE1-207ENST00000573203 TUFT1Q9NNX1 390 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 DACT1Q9NYF0 836 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 SMC3Q9UQE7 1217 aa10.11□□□□□ -0.79
NDE1-207ENST00000573203 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 DPYSL4O14531 572 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 ASAP2O43150 1006 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 HOXA2O43364 376 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 SRGAP2CP0DJJ0 459 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 LAMTOR4Q0VGL1 99 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 AAK1Q2M2I8 961 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 TIGD5Q53EQ6 642 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 FERMT3Q86UX7 667 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 ECHDC2Q86YB7 292 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 ABI1Q8IZP0 508 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 RNF169Q8NCN4 708 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 PIGOQ8TEQ8 1089 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 HLA-CQ95604 372 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 ASB2Q96Q27 587 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 PLVAPQ9BX97 442 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 COL25A1Q9BXS0 654 aaPredicted RBP10.1□□□□□ -0.79
NDE1-207ENST00000573203 LMAN2LQ9H0V9 348 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 CHST12Q9NRB3 414 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 COG5Q9UP83 839 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 PIN4Q9Y237 131 aaKnown RBP10.1□□□□□ -0.79
NDE1-207ENST00000573203 ZDHHC9Q9Y397 364 aa10.1□□□□□ -0.79
NDE1-207ENST00000573203 ATG2AQ2TAZ0 1938 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 A0A087WWV3 80 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 A0A0U1RQF3 1178 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 TK2O00142 265 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 GRM6O15303 877 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 USO1O60763 962 aaKnown RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 MED24O75448 989 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 DGAT1O75907 488 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 CSPG5O95196 566 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 SPATA31C1P0DKV0 1188 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 XRCC6P12956 609 aaKnown RBP eCLIP10.09□□□□□ -0.798e-7■■□□□ 11.8
NDE1-207ENST00000573203 RARRES1P49788 294 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 TOB1P50616 345 aaPredicted RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 TFF2Q03403 129 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 PTGDRQ13258 359 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 MXD4Q14582 209 aaPredicted RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 NAALADL2Q58DX5 795 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 HAUS3Q68CZ6 603 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 TWF2Q6IBS0 349 aaKnown RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 SRGAP1Q7Z6B7 1085 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 CATSPER3Q86XQ3 398 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 C4orf32Q8N8J7 132 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 RNF149Q8NC42 400 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 P2RX5Q93086 422 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 NACC1Q96RE7 527 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 POLR3CQ9BUI4 534 aaPredicted RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 RAB34Q9BZG1 259 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 TMEM117Q9H0C3 514 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 NSUN3Q9H649 340 aaKnown RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 IFT122Q9HBG6 1241 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 ALG13Q9NP73 1137 aaKnown RBP10.09□□□□□ -0.79
NDE1-207ENST00000573203 XPNPEP1Q9NQW7 623 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 AAASQ9NRG9 546 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 PCDHB6Q9Y5E3 794 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 PCDHB12Q9Y5F1 795 aa10.09□□□□□ -0.79
NDE1-207ENST00000573203 PLXNA4Q9HCM2 1894 aa10.08□□□□□ -0.8
NDE1-207ENST00000573203 TCF20Q9UGU0 1960 aaKnown RBP10.08□□□□□ -0.8
NDE1-207ENST00000573203 ARHGEF35A5YM69 484 aa10.08□□□□□ -0.8
NDE1-207ENST00000573203 LAD1O00515 517 aa10.08□□□□□ -0.8
NDE1-207ENST00000573203 EOMESO95936 686 aa10.08□□□□□ -0.8
NDE1-207ENST00000573203 SKIP12755 728 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms