RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 RARRES1P49788 294 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 SKIDA1Q1XH10 827 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 BEST2Q8NFU1 509 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 ZBED3Q96IU2 234 aaPredicted RBP10.95□□□□□ -0.66
SMG6-213ENST00000573166 ACAP3Q96P50 834 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 MTMR9Q96QG7 549 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 NAA15Q9BXJ9 866 aaKnown RBP10.95□□□□□ -0.66
SMG6-213ENST00000573166 TSGA10Q9BZW7 698 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 C17orf75Q9HAS0 396 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 HPSEQ9Y251 543 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 CTAGE9A4FU28 777 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 ZBTB22O15209 634 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 VTNP04004 478 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 CELF3Q5SZQ8 465 aaKnown RBP10.95□□□□□ -0.66
SMG6-213ENST00000573166 CXCL17Q6UXB2 119 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 REPS2Q8NFH8 660 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 MYRIPQ8NFW9 859 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 TRAPPC12Q8WVT3 735 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 KBTBD4Q9NVX7 518 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 CGNQ9P2M7 1197 aaKnown RBP10.95□□□□□ -0.66
SMG6-213ENST00000573166 PAPPAQ13219 1627 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 NAA30Q147X3 362 aaPredicted RBP10.95□□□□□ -0.66
SMG6-213ENST00000573166 LMBRD2Q68DH5 695 aaPredicted RBP10.95□□□□□ -0.66
SMG6-213ENST00000573166 KIF12Q96FN5 646 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 KCNMB3Q9NPA1 279 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 PDGFCQ9NRA1 345 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 HSPBP1Q9NZL4 362 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 GOLGA6L10A0A0M3HER8 536 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 PSMD10O75832 226 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 ATF7IP2Q5U623 682 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 SAPCD2Q86UD0 394 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 CCDC60Q8IWA6 550 aaPredicted RBP10.95□□□□□ -0.66
SMG6-213ENST00000573166 URGCPQ8TCY9 931 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 FAM81BQ96LP2 452 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 USTQ9Y2C2 406 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 CYP3A7-CYP3A51PA0A087WV96 503 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 ZBTB39O15060 712 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 LGALS2P05162 132 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 FERP16591 822 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 CYP3A7P24462 503 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 DUOXA2Q1HG44 320 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 OR6B3Q8NGW1 331 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.94□□□□□ -0.66
SMG6-213ENST00000573166 MICAL1Q8TDZ2 1067 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 CLEC4DQ8WXI8 215 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 INPP4AQ96PE3 977 aaPredicted RBP10.94□□□□□ -0.66
SMG6-213ENST00000573166 LBHD1Q9BQE6 289 aaPredicted RBP10.94□□□□□ -0.66
SMG6-213ENST00000573166 VIRMAQ69YN4 1812 aaKnown RBP10.94□□□□□ -0.66
SMG6-213ENST00000573166 THAP12O43422 761 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 MSCO60682 206 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 GFPT2O94808 682 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 UPP2O95045 317 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 SOX10P56693 466 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 FSTL1Q12841 308 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 GRIK4Q16099 956 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 ZNF699Q32M78 642 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 ZNF394Q53GI3 561 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 FAM117BQ6P1L5 589 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 PRIMPOLQ96LW4 560 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 SPATA31C2B4DYI2 1134 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 ERLIN1O75477 346 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 NSFP46459 744 aaKnown RBP10.94□□□□□ -0.66
SMG6-213ENST00000573166 NPTX2P47972 431 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 RNASE9P60153 205 aaKnown RBP10.94□□□□□ -0.66
SMG6-213ENST00000573166 RBL2Q08999 1139 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 GOLGA8FQ08AF8 430 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 GOLGA8DPQ0D2H9 430 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 GIT2Q14161 759 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 MFSD10Q14728 455 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 COL20A1Q9P218 1284 aa10.94□□□□□ -0.66
SMG6-213ENST00000573166 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMG6-213ENST00000573166 CAPN9O14815 690 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 POLR2BP30876 1174 aaKnown RBP10.93□□□□□ -0.66
SMG6-213ENST00000573166 KCNJ6P48051 423 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 LDLRAD1Q5T700 205 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 KRT39Q6A163 491 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 FAM133AQ8N9E0 248 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 PNMA5Q96PV4 448 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 DESI2Q9BSY9 194 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 RNF216Q9NWF9 866 aaPredicted RBP10.93□□□□□ -0.66
SMG6-213ENST00000573166 ATP11BQ9Y2G3 1177 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 GSTTP1A0A1W2PQM5 241 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 LGALS16A8MUM7 142 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 KIAA0391O15091 583 aaKnown RBP10.93□□□□□ -0.66
SMG6-213ENST00000573166 CSDE1O75534 798 aaKnown RBP10.93□□□□□ -0.66
SMG6-213ENST00000573166 H2AFZP0C0S5 128 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 GRK4P32298 578 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 PSEN2P49810 448 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 H2AFVQ71UI9 128 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 RASAL3Q86YV0 1011 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 MTIF3Q9H2K0 278 aaKnown RBP10.93□□□□□ -0.66
SMG6-213ENST00000573166 TXNRD2Q9NNW7 524 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 EMSYQ7Z589 1322 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 PQBP1O60828 265 aaKnown RBP10.93□□□□□ -0.66
SMG6-213ENST00000573166 HUS1O60921 280 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 NAMPTP43490 491 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 PAK2Q13177 524 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 SYT10Q6XYQ8 523 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 CCDC117Q8IWD4 279 aaPredicted RBP10.93□□□□□ -0.66
SMG6-213ENST00000573166 DBR1Q9UK59 544 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms