RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 PRAMEF9Q5VWM5 478 aa4.8□□□□□ -1.64
ERCC4-204ENST00000573018 CC2D1AQ6P1N0 951 aaPredicted RBP4.8□□□□□ -1.64
ERCC4-204ENST00000573018 APBB1IPQ7Z5R6 666 aaPredicted RBP4.8□□□□□ -1.64
ERCC4-204ENST00000573018 CMTR2Q8IYT2 770 aaKnown RBP4.8□□□□□ -1.64
ERCC4-204ENST00000573018 LCORLQ8N3X6 602 aa4.8□□□□□ -1.64
ERCC4-204ENST00000573018 MAML3Q96JK9 1138 aa4.8□□□□□ -1.64
ERCC4-204ENST00000573018 CPPED1Q9BRF8 314 aaPredicted RBP4.8□□□□□ -1.64
ERCC4-204ENST00000573018 KCNH6Q9H252 994 aa4.8□□□□□ -1.64
ERCC4-204ENST00000573018 EPC1Q9H2F5 836 aa4.8□□□□□ -1.64
ERCC4-204ENST00000573018 C14orf93Q9H972 538 aaKnown RBP4.8□□□□□ -1.64
ERCC4-204ENST00000573018 KCMF1Q9P0J7 381 aa4.8□□□□□ -1.64
ERCC4-204ENST00000573018 CFBP00751 764 aa4.79□□□□□ -1.64
ERCC4-204ENST00000573018 APPP05067 770 aa4.79□□□□□ -1.64
ERCC4-204ENST00000573018 ZBTB48P10074 688 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-204ENST00000573018 ABHD17CQ6PCB6 329 aa4.79□□□□□ -1.64
ERCC4-204ENST00000573018 IGSF22Q8N9C0 903 aa4.79□□□□□ -1.64
ERCC4-204ENST00000573018 SLC7A14Q8TBB6 771 aa4.79□□□□□ -1.64
ERCC4-204ENST00000573018 E2F7Q96AV8 911 aa4.79□□□□□ -1.64
ERCC4-204ENST00000573018 MYEOVQ96EZ4 313 aa4.79□□□□□ -1.64
ERCC4-204ENST00000573018 UBA6A0AVT1 1052 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-204ENST00000573018 ITGB6P18564 788 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 APOBEC3AP31941 199 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-204ENST00000573018 PLA2G5P39877 138 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 TAP1Q03518 808 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 TMEM177Q53S58 311 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 CCDC62Q6P9F0 684 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 SCLYQ96I15 445 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 MAGEB10Q96LZ2 347 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-204ENST00000573018 TUBGCP5Q96RT8 1024 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 BOCQ9BWV1 1114 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 SLC46A2Q9BY10 475 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 CPEB1Q9BZB8 566 aaKnown RBP4.78□□□□□ -1.64
ERCC4-204ENST00000573018 TRPM5Q9NZQ8 1165 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 TESQ9UGI8 421 aaKnown RBP4.78□□□□□ -1.64
ERCC4-204ENST00000573018 MSRB2Q9Y3D2 182 aa4.78□□□□□ -1.64
ERCC4-204ENST00000573018 COL11A2P13942 1736 aaPredicted RBP4.77□□□□□ -1.65
ERCC4-204ENST00000573018 NCR1O76036 304 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 TYRP1P17643 537 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 KCNA6P17658 529 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 FNTBP49356 437 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 KIF11P52732 1056 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 TTC38Q5R3I4 469 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 ZNF362Q5T0B9 420 aaPredicted RBP4.77□□□□□ -1.65
ERCC4-204ENST00000573018 BMP8AQ7Z5Y6 402 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 LILRA3Q8N6C8 439 aaPredicted RBP4.77□□□□□ -1.65
ERCC4-204ENST00000573018 GSTCDQ8NEC7 633 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 CAVIN3Q969G5 261 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 ING3Q9NXR8 418 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 INSL6Q9Y581 213 aa4.77□□□□□ -1.65
ERCC4-204ENST00000573018 EPN1Q9Y6I3 576 aaPredicted RBP4.77□□□□□ -1.65
ERCC4-204ENST00000573018 DVL2O14641 736 aa4.76□□□□□ -1.65
ERCC4-204ENST00000573018 ZNF185O15231 689 aa4.76□□□□□ -1.65
ERCC4-204ENST00000573018 HOXA3O43365 443 aaPredicted RBP4.76□□□□□ -1.65
ERCC4-204ENST00000573018 EFCAB14O75071 495 aa4.76□□□□□ -1.65
ERCC4-204ENST00000573018 NDUFA10O95299 355 aa4.76□□□□□ -1.65
ERCC4-204ENST00000573018 RASGRF1Q13972 1273 aa4.76□□□□□ -1.65
ERCC4-204ENST00000573018 VPS72Q15906 364 aa4.76□□□□□ -1.65
ERCC4-204ENST00000573018 UIMC1Q96RL1 719 aa4.76□□□□□ -1.65
ERCC4-204ENST00000573018 NDC1Q9BTX1 674 aa4.76□□□□□ -1.65
ERCC4-204ENST00000573018 AKIP1Q9NQ31 210 aa4.76□□□□□ -1.65
ERCC4-204ENST00000573018 SYBUQ9NX95 663 aa4.76□□□□□ -1.65
ERCC4-204ENST00000573018 KDM2BQ8NHM5 1336 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 UNC119BA6NIH7 251 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 TMEM200CA6NKL6 621 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 MTSS1O43312 755 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 DNAJC6O75061 913 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 AVPR1BP47901 424 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 MYBPC3Q14896 1274 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 PRR16Q569H4 304 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 OTOP1Q7RTM1 612 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 GDF7Q7Z4P5 450 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 FGD2Q7Z6J4 655 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 ARHGEF19Q8IW93 802 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 BOLLQ8N9W6 283 aaKnown RBP4.75□□□□□ -1.65
ERCC4-204ENST00000573018 OR52N2Q8NGI0 321 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 RPGRQ92834 1020 aaKnown RBP4.75□□□□□ -1.65
ERCC4-204ENST00000573018 HAPLN2Q9GZV7 340 aa4.75□□□□□ -1.65
ERCC4-204ENST00000573018 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.75□□□□□ -1.65
ERCC4-204ENST00000573018 TCRBV16S1A1N1A0A5B0 115 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 LEFTY2O00292 366 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 RNASET2O00584 256 aaKnown RBP4.74□□□□□ -1.65
ERCC4-204ENST00000573018 CXCR5P32302 372 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 CASRP41180 1078 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 SEC24CP53992 1094 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 FOXI1Q12951 378 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 ERCC6LQ2NKX8 1250 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 HDGFL2Q7Z4V5 671 aaPredicted RBP4.74□□□□□ -1.65
ERCC4-204ENST00000573018 BRAPQ7Z569 592 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 FAM83AQ86UY5 434 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 GLB1L3Q8NCI6 653 aaPredicted RBP4.74□□□□□ -1.65
ERCC4-204ENST00000573018 OR5M3Q8NGP4 307 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 GMLQ99445 158 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 LSM14BQ9BX40 385 aaKnown RBP4.74□□□□□ -1.65
ERCC4-204ENST00000573018 ENKD1Q9H0I2 346 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 PCIF1Q9H4Z3 704 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 SYNPO2Q9UMS6 1093 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 FRMD4BQ9Y2L6 1034 aa4.74□□□□□ -1.65
ERCC4-204ENST00000573018 MYADML2A6NDP7 307 aa4.73□□□□□ -1.65
ERCC4-204ENST00000573018 PTX3P26022 381 aaPredicted RBP4.73□□□□□ -1.65
ERCC4-204ENST00000573018 BCAR1P56945 870 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms