RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 H3BNC9 293 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 LINC00271P0C7V0 271 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 SKIP12755 728 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 PDIA4P13667 645 aaKnown RBP22.89■■□□□ 1.25
CHMP6-204ENST00000572778 POU3F3P20264 500 aaPredicted RBP22.89■■□□□ 1.25
CHMP6-204ENST00000572778 HOXA11P31270 313 aaPredicted RBP22.89■■□□□ 1.25
CHMP6-204ENST00000572778 MBTD1Q05BQ5 628 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 PCBP1Q15365 356 aaKnown RBP eCLIP22.89■■□□□ 1.25
CHMP6-204ENST00000572778 LONRF3Q496Y0 759 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 SPOUT1Q5T280 376 aaKnown RBP22.89■■□□□ 1.25
CHMP6-204ENST00000572778 ZBTB8OSQ8IWT0 167 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 RASSF8Q8NHQ8 419 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 USP28Q96RU2 1077 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 TRAIPQ9BWF2 469 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 NFKBIZQ9BYH8 718 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 TMEM117Q9H0C3 514 aa22.89■■□□□ 1.25
CHMP6-204ENST00000572778 TSPAN1O60635 241 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 RB1P06400 928 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 ATF7P17544 494 aaPredicted RBP22.88■■□□□ 1.25
CHMP6-204ENST00000572778 RAB27AP51159 221 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 TMEM119Q4V9L6 283 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 RINT1Q6NUQ1 792 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 ZNF598Q86UK7 904 aaKnown RBP22.88■■□□□ 1.25
CHMP6-204ENST00000572778 KCTD17Q8N5Z5 321 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 BSNDQ8WZ55 320 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 KIFAP3Q92845 792 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 CPB2Q96IY4 423 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 IFT74Q96LB3 600 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 RUSC1Q9BVN2 902 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 RNF19AQ9NV58 838 aa22.88■■□□□ 1.25
CHMP6-204ENST00000572778 SLC26A4O43511 780 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 ZSCAN22P10073 491 aaPredicted RBP22.87■■□□□ 1.25
CHMP6-204ENST00000572778 AXLP30530 894 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 PPP2R5AQ15172 486 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 SPECC1Q5M775 1068 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 DEPTORQ8TB45 409 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 HELQQ8TDG4 1101 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 LPPQ93052 612 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 ZNF396Q96N95 335 aaPredicted RBP22.87■■□□□ 1.25
CHMP6-204ENST00000572778 CASD1Q96PB1 797 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 C11orf84Q9BUA3 381 aaPredicted RBP22.87■■□□□ 1.25
CHMP6-204ENST00000572778 CSRNP2Q9H175 543 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 C2orf40Q9H1Z8 148 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 TYW1Q9NV66 732 aaKnown RBP22.87■■□□□ 1.25
CHMP6-204ENST00000572778 LMCD1Q9NZU5 365 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 FBXO2Q9UK22 296 aaPredicted RBP22.87■■□□□ 1.25
CHMP6-204ENST00000572778 PCDHB2Q9Y5E7 798 aa22.87■■□□□ 1.25
CHMP6-204ENST00000572778 SRPRBQ9Y5M8 271 aaKnown RBP22.87■■□□□ 1.25
CHMP6-204ENST00000572778 CHD7Q9P2D1 2997 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 C5orf67F2Z3F1 127 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 HIP1RO75146 1068 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 PLA2G4BP0C869 781 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 NAMPTP43490 491 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 KARSQ15046 597 aaKnown RBP22.86■■□□□ 1.25
CHMP6-204ENST00000572778 AMHR2Q16671 573 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 CLLU1OSQ5K130 101 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 NOTUMQ6P988 496 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 C1orf186Q6ZWK4 172 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 SYT2Q8N9I0 419 aaPredicted RBP22.86■■□□□ 1.25
CHMP6-204ENST00000572778 SLC17A8Q8NDX2 589 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 CLIC6Q96NY7 704 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 PLVAPQ9BX97 442 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 HCSTQ9UBK5 93 aa22.86■■□□□ 1.25
CHMP6-204ENST00000572778 B4GALT5O43286 388 aa22.85■■□□□ 1.25
CHMP6-204ENST00000572778 ZNF623O75123 536 aa22.85■■□□□ 1.25
CHMP6-204ENST00000572778 LIG1P18858 919 aa22.85■■□□□ 1.25
CHMP6-204ENST00000572778 RAD51AP2Q09MP3 1159 aa22.85■■□□□ 1.25
CHMP6-204ENST00000572778 SLC39A14Q15043 492 aa22.85■■□□□ 1.25
CHMP6-204ENST00000572778 SKIV2LQ15477 1246 aaKnown RBP22.85■■□□□ 1.25
CHMP6-204ENST00000572778 PTPROQ16827 1216 aa22.85■■□□□ 1.25
CHMP6-204ENST00000572778 FOXD4L6Q3SYB3 417 aaPredicted RBP22.85■■□□□ 1.25
CHMP6-204ENST00000572778 UBXN11Q5T124 520 aa22.85■■□□□ 1.25
CHMP6-204ENST00000572778 CDCA2Q69YH5 1023 aaPredicted RBP22.85■■□□□ 1.25
CHMP6-204ENST00000572778 FOXD4L3Q6VB84 417 aaPredicted RBP22.85■■□□□ 1.25
CHMP6-204ENST00000572778 PGBD4Q96DM1 585 aa22.85■■□□□ 1.25
CHMP6-204ENST00000572778 AAASQ9NRG9 546 aa22.85■■□□□ 1.25
CHMP6-204ENST00000572778 TFIP11Q9UBB9 837 aaKnown RBP22.85■■□□□ 1.25
CHMP6-204ENST00000572778 F13A1P00488 732 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 ARF4P18085 180 aaPredicted RBP22.84■■□□□ 1.25
CHMP6-204ENST00000572778 SLC12A3P55017 1021 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 DHX8Q14562 1220 aaKnown RBP22.84■■□□□ 1.25
CHMP6-204ENST00000572778 STK38Q15208 465 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 TMEM132AQ24JP5 1023 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 LRRC43Q8N309 656 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 CCDC51Q96ER9 411 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 EPSTI1Q96J88 318 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 DRC1Q96MC2 740 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 KIFC3Q9BVG8 833 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 EIF2AQ9BY44 585 aaKnown RBP22.84■■□□□ 1.25
CHMP6-204ENST00000572778 PRMT7Q9NVM4 692 aaPredicted RBP22.84■■□□□ 1.25
CHMP6-204ENST00000572778 PCDHB12Q9Y5F1 795 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 COL6A3P12111 3177 aa22.84■■□□□ 1.25
CHMP6-204ENST00000572778 CCDC169A6NNP5 214 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 MEIS3P2A8K0S8 358 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 SFI1A8K8P3 1242 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 GRM6O15303 877 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 PLCG1P19174 1290 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 NASPP49321 788 aaPredicted RBP22.83■■□□□ 1.25
CHMP6-204ENST00000572778 PEX3P56589 373 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 PKP1Q13835 747 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms