RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 CXCL10P02778 98 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 MYL1P05976 194 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 NPTX2P47972 431 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 NCBP1Q09161 790 aaKnown RBP16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 SNW1Q13573 536 aaKnown RBP16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 CUL4BQ13620 913 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 TMEM132AQ24JP5 1023 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 CNKSR3Q6P9H4 555 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 PSRC1Q6PGN9 363 aaPredicted RBP16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 FAM178BQ8IXR5 827 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 DBF4BQ8NFT6 615 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 SPIRE2Q8WWL2 714 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 APBB2Q92870 758 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 KIFC3Q9BVG8 833 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 UBE2OQ9C0C9 1292 aaKnown RBP16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 AGO3Q9H9G7 860 aaKnown RBP16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 DACT1Q9NYF0 836 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 PADI3Q9ULW8 664 aa16.01■□□□□ 0.15
NPLOC4-209ENST00000572760 K7ENM7 598 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 K7ERI5 159 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 SLC16A4O15374 487 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 FGFR4P22455 802 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 CASP1P29466 404 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 ZNF131P52739 623 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 EFNA5P52803 228 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 IKBKEQ14164 716 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 GPNMBQ14956 572 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 MAPK6Q16659 721 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 PLEKHG4Q58EX7 1191 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 UNC13DQ70J99 1090 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 ZNF365Q70YC5 407 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 FAM228AQ86W67 206 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 SFR1Q86XK3 245 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 IFNLR1Q8IU57 520 aaPredicted RBP16■□□□□ 0.15
NPLOC4-209ENST00000572760 SLC17A8Q8NDX2 589 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 NFKBIZQ9BYH8 718 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 OSBPL7Q9BZF2 842 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 MTIF3Q9H2K0 278 aaKnown RBP16■□□□□ 0.15
NPLOC4-209ENST00000572760 MRPL44Q9H9J2 332 aaKnown RBP16■□□□□ 0.15
NPLOC4-209ENST00000572760 PRMT7Q9NVM4 692 aaPredicted RBP16■□□□□ 0.15
NPLOC4-209ENST00000572760 SEL1LQ9UBV2 794 aa16■□□□□ 0.15
NPLOC4-209ENST00000572760 PHLPP2Q6ZVD8 1323 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 PVALEFA0A1B0GWK0 134 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 ZBBXA8MT70 800 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 ZSCAN20P17040 1043 aaPredicted RBP15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 MCM4P33991 863 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 MBTD1Q05BQ5 628 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 STRN3Q13033 797 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 COASYQ13057 564 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 POSTNQ15063 836 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 PCBP1Q15365 356 aaKnown RBP eCLIP15.99■□□□□ 0.154e-13■□□□□ 8.5
NPLOC4-209ENST00000572760 CDCA2Q69YH5 1023 aaPredicted RBP15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 CNNM4Q6P4Q7 775 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 OTOP2Q7RTS6 562 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 NTPCRQ9BSD7 190 aaKnown RBP15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 FTHL17Q9BXU8 183 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 MINDY3Q9H8M7 445 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 ERVK-5Q9HDB9 667 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 TBC1D7Q9P0N9 293 aa15.99■□□□□ 0.15
NPLOC4-209ENST00000572760 DENND3A2RUS2 1198 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 SMC2O95347 1197 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 PRKCBP05771 671 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 PRR29P0C7W0 189 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 NMT1P30419 496 aaKnown RBP15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 KCNJ6P48051 423 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 EPHB4P54760 987 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 TMEM240Q5SV17 173 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 STXBP4Q6ZWJ1 553 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 HAUS6Q7Z4H7 955 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.98■□□□□ 0.152e-18■□□□□ 10.7
NPLOC4-209ENST00000572760 TMEM134Q9H6X4 195 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 EXOC1Q9NV70 894 aa15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 PIN4Q9Y237 131 aaKnown RBP15.98■□□□□ 0.15
NPLOC4-209ENST00000572760 TTC3P53804 2025 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 ADGRA3Q8IWK6 1321 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 ABHD14A-ACY1A0A1B0GW23 586 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 FRMD3A2A2Y4 597 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 EFCAB14O75071 495 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 GCNT3O95395 438 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 MBD3O95983 291 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 RPN1P04843 607 aaKnown RBP15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 MAPTP10636 758 aaKnown RBP15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 PTMSP20962 102 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 IBSPP21815 317 aaPredicted RBP15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 SCP2P22307 547 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 ABCD1P33897 745 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 NCKAP1LP55160 1127 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 PNOCQ13519 176 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 PRPF4BQ13523 1007 aaKnown RBP15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 FAM26FQ5R3K3 315 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 FAM43BQ6ZT52 329 aaPredicted RBP15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 C16orf59Q7L2K0 433 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 PRIMPOLQ96LW4 560 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 GDF15Q99988 308 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 FZD8Q9H461 694 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 ARHGAP28Q9P2N2 729 aa15.97■□□□□ 0.15
NPLOC4-209ENST00000572760 ACKR2O00590 384 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 BAIAP3O94812 1187 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 AXLP30530 894 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 DPYDQ12882 1025 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms