RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 PCBP1Q15365 356 aaKnown RBP eCLIP17.93■□□□□ 0.468e-6■□□□□ 10.9
NDE1-205ENST00000572756 SKIV2LQ15477 1246 aaKnown RBP17.93■□□□□ 0.46
NDE1-205ENST00000572756 TIGD5Q53EQ6 642 aa17.93■□□□□ 0.46
NDE1-205ENST00000572756 BRAPQ7Z569 592 aa17.93■□□□□ 0.46
NDE1-205ENST00000572756 KLHL23Q8NBE8 558 aa17.93■□□□□ 0.46
NDE1-205ENST00000572756 SNX29Q8TEQ0 813 aa17.93■□□□□ 0.46
NDE1-205ENST00000572756 GPRC5CQ9NQ84 441 aa17.93■□□□□ 0.46
NDE1-205ENST00000572756 FAM105AQ9NUU6 356 aa17.93■□□□□ 0.46
NDE1-205ENST00000572756 ARHGEF35A5YM69 484 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 SKIP12755 728 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 CYP11B2P19099 503 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 PDCP20941 246 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 CDC25AP30304 524 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 RAB27AP51159 221 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 MBTD1Q05BQ5 628 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 AMHR2Q16671 573 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 TJAP1Q5JTD0 557 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 UBXN11Q5T124 520 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 ARL6IP4Q66PJ3 421 aaKnown RBP17.92■□□□□ 0.46
NDE1-205ENST00000572756 PADI6Q6TGC4 694 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 COLGALT1Q8NBJ5 622 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 SPPL3Q8TCT6 385 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 SNX21Q969T3 373 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 ASB2Q96Q27 587 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 COL25A1Q9BXS0 654 aaPredicted RBP17.92■□□□□ 0.46
NDE1-205ENST00000572756 ALG13Q9NP73 1137 aaKnown RBP17.92■□□□□ 0.46
NDE1-205ENST00000572756 DDX19AQ9NUU7 478 aaKnown RBP17.92■□□□□ 0.46
NDE1-205ENST00000572756 COG5Q9UP83 839 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 KIAA1024Q9UPX6 916 aa17.92■□□□□ 0.46
NDE1-205ENST00000572756 TSPAN1O60635 241 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 DNAJB1P25685 340 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 MRPS5P82675 430 aaKnown RBP17.91■□□□□ 0.46
NDE1-205ENST00000572756 TFF2Q03403 129 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 COL19A1Q14993 1142 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 HYIQ5T013 277 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 KRT79Q5XKE5 535 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 MAEAQ7L5Y9 396 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 LRRC43Q8N309 656 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 RNF169Q8NCN4 708 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 HELQQ8TDG4 1101 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 RSPH1Q8WYR4 309 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 BHMT2Q9H2M3 363 aa17.91■□□□□ 0.46
NDE1-205ENST00000572756 NSUN3Q9H649 340 aaKnown RBP17.91■□□□□ 0.46
NDE1-205ENST00000572756 NCOR1O75376 2440 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.9■□□□□ 0.46
NDE1-205ENST00000572756 VPS37CA5D8V6 355 aaPredicted RBP17.9■□□□□ 0.46
NDE1-205ENST00000572756 MEIS3P2A8K0S8 358 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 DLL1O00548 723 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 LAG3P18627 525 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 SYT1P21579 422 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 AXLP30530 894 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 TCEAL5Q5H9L2 206 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 SPOUT1Q5T280 376 aaKnown RBP17.9■□□□□ 0.46
NDE1-205ENST00000572756 CDCA2Q69YH5 1023 aaPredicted RBP17.9■□□□□ 0.46
NDE1-205ENST00000572756 MRPL10Q7Z7H8 261 aaKnown RBP17.9■□□□□ 0.46
NDE1-205ENST00000572756 ABI1Q8IZP0 508 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 BSNDQ8WZ55 320 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 LPPQ93052 612 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 HLA-CQ95604 372 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 AAASQ9NRG9 546 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 PCDHB2Q9Y5E7 798 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 PCDHB12Q9Y5F1 795 aa17.9■□□□□ 0.46
NDE1-205ENST00000572756 TCF20Q9UGU0 1960 aaKnown RBP17.9■□□□□ 0.46
NDE1-205ENST00000572756 VWA3AA6NCI4 1184 aa17.89■□□□□ 0.45
NDE1-205ENST00000572756 INO80B-WBP1J3KQ70 363 aa17.89■□□□□ 0.45
NDE1-205ENST00000572756 ERLIN2O94905 339 aa17.89■□□□□ 0.45
NDE1-205ENST00000572756 EYA4O95677 639 aa17.89■□□□□ 0.45
NDE1-205ENST00000572756 CSPP1Q1MSJ5 1256 aa17.89■□□□□ 0.45
NDE1-205ENST00000572756 AGMOQ6ZNB7 445 aa17.89■□□□□ 0.45
NDE1-205ENST00000572756 KCNK18Q7Z418 384 aa17.89■□□□□ 0.45
NDE1-205ENST00000572756 POF1BQ8WVV4 589 aa17.89■□□□□ 0.45
NDE1-205ENST00000572756 CCDC51Q96ER9 411 aa17.89■□□□□ 0.45
NDE1-205ENST00000572756 MRPL9Q9BYD2 267 aaKnown RBP17.89■□□□□ 0.45
NDE1-205ENST00000572756 LRRIQ4A6NIV6 560 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 E9PMD0 336 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 OFD1O75665 1012 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 FGF18O76093 207 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 BMP15O95972 392 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 ARF4P18085 180 aaPredicted RBP17.88■□□□□ 0.45
NDE1-205ENST00000572756 UBE3AQ05086 875 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 RESTQ13127 1097 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 LONRF3Q496Y0 759 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 NOTUMQ6P988 496 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 KCNT2Q6UVM3 1135 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 PPP4R3CPQ6ZMV5 832 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 PGBD4Q96DM1 585 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 CPB2Q96IY4 423 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 PNMA5Q96PV4 448 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 UBE2ZQ9H832 354 aaPredicted RBP17.88■□□□□ 0.45
NDE1-205ENST00000572756 DNM3Q9UQ16 869 aa17.88■□□□□ 0.45
NDE1-205ENST00000572756 B4GALT5O43286 388 aa17.87■□□□□ 0.45
NDE1-205ENST00000572756 BMP1P13497 986 aa17.87■□□□□ 0.45
NDE1-205ENST00000572756 NCLP19338 710 aaKnown RBP17.87■□□□□ 0.45
NDE1-205ENST00000572756 IRS1P35568 1242 aa17.87■□□□□ 0.45
NDE1-205ENST00000572756 NAMPTP43490 491 aa17.87■□□□□ 0.45
NDE1-205ENST00000572756 PLCB3Q01970 1234 aa17.87■□□□□ 0.45
NDE1-205ENST00000572756 SF3A1Q15459 793 aaKnown RBP17.87■□□□□ 0.45
NDE1-205ENST00000572756 FAM187BQ17R55 369 aa17.87■□□□□ 0.45
NDE1-205ENST00000572756 AAK1Q2M2I8 961 aa17.87■□□□□ 0.45
NDE1-205ENST00000572756 GLB1LQ6UWU2 654 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms