RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 CFAP45Q9UL16 551 aa17.52■□□□□ 0.4
CHD3-215ENST00000572750 HCN4Q9Y3Q4 1203 aa17.52■□□□□ 0.4
CHD3-215ENST00000572750 TTC3P53804 2025 aa17.52■□□□□ 0.39
CHD3-215ENST00000572750 A0A087X0B3 334 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 DENND3A2RUS2 1198 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 LRRIQ4A6NIV6 560 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 ENPP3O14638 875 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 ASAP2O43150 1006 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 GJB5O95377 273 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 ME1P48163 572 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 KRT85P78386 507 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 TFDP1Q14186 410 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 DHX8Q14562 1220 aaKnown RBP17.51■□□□□ 0.39
CHD3-215ENST00000572750 ODR4Q5SWX8 454 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 RINT1Q6NUQ1 792 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 RTN4RL1Q86UN2 441 aaPredicted RBP17.51■□□□□ 0.39
CHD3-215ENST00000572750 SYT2Q8N9I0 419 aaPredicted RBP17.51■□□□□ 0.39
CHD3-215ENST00000572750 RAD54LQ92698 747 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 GAS2L1Q99501 681 aaPredicted RBP17.51■□□□□ 0.39
CHD3-215ENST00000572750 ADAM2Q99965 735 aa17.51■□□□□ 0.39
CHD3-215ENST00000572750 USP34Q70CQ2 3546 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 NPHP3-ACAD11A0A0J9YXS1 232 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 LCHNA4D1U4 455 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 TLL1O43897 1013 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 CUTAO60888 179 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 HIP1RO75146 1068 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 CA3P07451 260 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 KCNQ1P51787 676 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 NUCB2P80303 420 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 MBTD1Q05BQ5 628 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 MCM6Q14566 821 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 RAB30Q15771 203 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 AXDND1Q5T1B0 1012 aaPredicted RBP17.5■□□□□ 0.39
CHD3-215ENST00000572750 SHC4Q6S5L8 630 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 C1orf186Q6ZWK4 172 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 CATSPER4Q7RTX7 472 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 GPBP1Q86WP2 473 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 DAW1Q8N136 415 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 KCTD17Q8N5Z5 321 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 LEO1Q8WVC0 666 aaPredicted RBP17.5■□□□□ 0.39
CHD3-215ENST00000572750 LARP4BQ92615 738 aaKnown RBP17.5■□□□□ 0.39
CHD3-215ENST00000572750 ZBED2Q9BTP6 218 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 KIFC3Q9BVG8 833 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 NKX2-4Q9H2Z4 354 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 PCDHA7Q9UN72 937 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 PIN4Q9Y237 131 aaKnown RBP17.5■□□□□ 0.39
CHD3-215ENST00000572750 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 ATP6V1DQ9Y5K8 247 aa17.5■□□□□ 0.39
CHD3-215ENST00000572750 COL4A4P53420 1690 aaPredicted RBP17.49■□□□□ 0.39
CHD3-215ENST00000572750 INO80B-WBP1J3KQ70 363 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 ARHGEF15O94989 841 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 PTENP60484 403 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
CHD3-215ENST00000572750 MAPK7Q13164 816 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 DSC3Q14574 896 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 NAALADL2Q58DX5 795 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 CDCA2Q69YH5 1023 aaPredicted RBP17.49■□□□□ 0.39
CHD3-215ENST00000572750 SRGAP1Q7Z6B7 1085 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 PDILTQ8N807 584 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 KIFAP3Q92845 792 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 TOP1MTQ969P6 601 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 SPATA32Q96LK8 384 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 INO80BQ9C086 356 aaPredicted RBP17.49■□□□□ 0.39
CHD3-215ENST00000572750 RGS18Q9NS28 235 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 AGPAT5Q9NUQ2 364 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 MSRAQ9UJ68 235 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 KIAA1671Q9BY89 1806 aa17.49■□□□□ 0.39
CHD3-215ENST00000572750 ADGRA3Q8IWK6 1321 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 NLRC5Q86WI3 1866 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 ERLIN2O94905 339 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 GUCY2CP25092 1073 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 STAT6P42226 847 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 NAMPTP43490 491 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 ARSHQ5FYA8 562 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 RRAGBQ5VZM2 374 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 IFNLR1Q8IU57 520 aaPredicted RBP17.48■□□□□ 0.39
CHD3-215ENST00000572750 DRC1Q96MC2 740 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 NFKBIZQ9BYH8 718 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 PANK2Q9BZ23 570 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 GDPD2Q9HCC8 539 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 STK17AQ9UEE5 414 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 RCOR1Q9UKL0 485 aa17.48■□□□□ 0.39
CHD3-215ENST00000572750 C9IYK1 514 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 TSPAN1O60635 241 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 ZSCAN20P17040 1043 aaPredicted RBP17.47■□□□□ 0.39
CHD3-215ENST00000572750 IGFBP4P22692 258 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 SARSP49591 514 aaKnown RBP17.47■□□□□ 0.39
CHD3-215ENST00000572750 PPP2R5AQ15172 486 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 PPP2R2DQ66LE6 453 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 CCDC73Q6ZRK6 1079 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 SLC24A5Q71RS6 500 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 SPRED2Q7Z698 418 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 ZBTB8OSQ8IWT0 167 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 DEPTORQ8TB45 409 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 IFT74Q96LB3 600 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 YME1L1Q96TA2 773 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 REEP2Q9BRK0 252 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 C1orf112Q9NSG2 853 aa17.47■□□□□ 0.39
CHD3-215ENST00000572750 KCND2Q9NZV8 630 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms