RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 C1orf186Q6ZWK4 172 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 CCDC197Q8NCU1 140 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 HOOK2Q96ED9 719 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 C8orf37Q96NL8 207 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 ZNF317Q96PQ6 595 aaPredicted RBP18.87■□□□□ 0.61
SCARF1-205ENST00000571272 AHDC1Q5TGY3 1603 aaPredicted RBP18.86■□□□□ 0.61
SCARF1-205ENST00000571272 FAM187AA6NFU0 413 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 DDTLA6NHG4 134 aaPredicted RBP18.86■□□□□ 0.61
SCARF1-205ENST00000571272 TRIM37O94972 964 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 RPL21P46778 160 aaKnown RBP18.86■□□□□ 0.61
SCARF1-205ENST00000571272 IFNAR2P48551 515 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 MYL7Q01449 175 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 LLGL1Q15334 1064 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 FAM178BQ8IXR5 827 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 ZDHHC14Q8IZN3 488 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 ZC3H12CQ9C0D7 883 aaKnown RBP18.86■□□□□ 0.61
SCARF1-205ENST00000571272 AGPAT3Q9NRZ7 376 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 RPTORQ8N122 1335 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 CCDC169A6NNP5 214 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 EIF3DO15371 548 aaKnown RBP eCLIP18.86■□□□□ 0.61
SCARF1-205ENST00000571272 CCDC172P0C7W6 258 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 UBXN2AP68543 259 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 ICA1Q05084 483 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 DHX34Q14147 1143 aaKnown RBP18.86■□□□□ 0.61
SCARF1-205ENST00000571272 E2F5Q15329 346 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 LACTB2Q53H82 288 aaPredicted RBP18.86■□□□□ 0.61
SCARF1-205ENST00000571272 LRRC34Q8IZ02 419 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 PRELID2Q8N945 189 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 EPS8L3Q8TE67 593 aaKnown RBP18.86■□□□□ 0.61
SCARF1-205ENST00000571272 PRMT1Q99873 361 aaKnown RBP18.86■□□□□ 0.61
SCARF1-205ENST00000571272 HSD17B14Q9BPX1 270 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 GRHL1Q9NZI5 618 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 PTPN22Q9Y2R2 807 aa18.86■□□□□ 0.61
SCARF1-205ENST00000571272 SMCHD1A6NHR9 2005 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 EXOC3O60645 756 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 FTLP02792 175 aaPredicted RBP18.85■□□□□ 0.61
SCARF1-205ENST00000571272 MMP13P45452 471 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 PPP2R5EQ16537 467 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 TTC27Q6P3X3 843 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 ZNF720Q7Z2F6 126 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 ATXN2LQ8WWM7 1075 aaKnown RBP18.85■□□□□ 0.61
SCARF1-205ENST00000571272 TEKT1Q969V4 418 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 AGPAT1Q99943 283 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 COA1Q9GZY4 146 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 RASAL2Q9UJF2 1139 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 FRMPD4Q14CM0 1322 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 CCT8L1PA6NM43 557 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 FOSP01100 380 aaPredicted RBP18.85■□□□□ 0.61
SCARF1-205ENST00000571272 PTGIRP43119 386 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 MESDQ14696 234 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 CCDC38Q502W7 563 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 ODR4Q5SWX8 454 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 BANK1Q8NDB2 785 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 MKL1Q969V6 931 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 CENPTQ96BT3 561 aa18.85■□□□□ 0.61
SCARF1-205ENST00000571272 ELAC2Q9BQ52 826 aaKnown RBP18.85■□□□□ 0.61
SCARF1-205ENST00000571272 UBE2TQ9NPD8 197 aaPredicted RBP18.85■□□□□ 0.61
SCARF1-205ENST00000571272 INTS9Q9NV88 658 aaKnown RBP18.85■□□□□ 0.61
SCARF1-205ENST00000571272 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.85■□□□□ 0.61
SCARF1-205ENST00000571272 BTAF1O14981 1849 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 SPICE1Q8N0Z3 855 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 PGM2Q96G03 612 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 NGLY1Q96IV0 654 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 FIZ1Q96SL8 496 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 KDM4CQ9H3R0 1056 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 NYAP2Q9P242 653 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 DBR1Q9UK59 544 aaKnown RBP18.84■□□□□ 0.61
SCARF1-205ENST00000571272 TCRBV7S2A1N4TA0A589 114 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 ATMINO43313 823 aaPredicted RBP18.84■□□□□ 0.61
SCARF1-205ENST00000571272 PHF2O75151 1096 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 NDUFB10O96000 172 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 VIMP08670 466 aaKnown RBP18.84■□□□□ 0.61
SCARF1-205ENST00000571272 GYS1P13807 737 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 CIITAP33076 1130 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 DLG4P78352 724 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 XRCC4Q13426 336 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 PPP1R7Q15435 360 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 PREPLQ4J6C6 727 aaPredicted RBP18.84■□□□□ 0.61
SCARF1-205ENST00000571272 SPDYCQ5MJ68 293 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 LRCH2Q5VUJ6 765 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 MAEAQ7L5Y9 396 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 OTOP1Q7RTM1 612 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 CCDC25Q86WR0 208 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 CPNE8Q86YQ8 564 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 SYCP3Q8IZU3 236 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 GIMAP7Q8NHV1 300 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 MKNK1Q9BUB5 465 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 WDR18Q9BV38 432 aa18.84■□□□□ 0.61
SCARF1-205ENST00000571272 KCNJ1P48048 391 aa18.83■□□□□ 0.61
SCARF1-205ENST00000571272 SYDE2Q5VT97 1194 aa18.83■□□□□ 0.61
SCARF1-205ENST00000571272 MSL1Q68DK7 614 aa18.83■□□□□ 0.61
SCARF1-205ENST00000571272 HIBCHQ6NVY1 386 aaPredicted RBP18.83■□□□□ 0.61
SCARF1-205ENST00000571272 CCDC137Q6PK04 289 aaKnown RBP18.83■□□□□ 0.61
SCARF1-205ENST00000571272 ANKS4BQ8N8V4 417 aa18.83■□□□□ 0.61
SCARF1-205ENST00000571272 PCIF1Q9H4Z3 704 aa18.83■□□□□ 0.61
SCARF1-205ENST00000571272 STK24Q9Y6E0 443 aa18.83■□□□□ 0.61
SCARF1-205ENST00000571272 ANKRD63C9JTQ0 380 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 UBL4BQ8N7F7 174 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 KCNQ5Q9NR82 932 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 LRRC4BQ9NT99 713 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms