RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RRN3P2A6NIE6 340 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 TBKBP1A7MCY6 615 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 HNRNPCL2B2RXH8 293 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 UBE2Q2LH0YL09 131 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 GABRDO14764 452 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 P4HA2O15460 535 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ZBTB14O43829 449 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 BRINP1O60477 761 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 HNRNPCL1O60812 293 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 TSC22D2O75157 780 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 TMEM127O75204 238 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 MAFO75444 373 aaPredicted RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 LGR5O75473 907 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 USP2O75604 605 aaPredicted RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 USP1O94782 785 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 APOA4P06727 396 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PYGLP06737 847 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PARP1P09874 1014 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 GZMAP12544 262 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 RXRAP19793 462 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SYT1P21579 422 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PSMA5P28066 241 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ALDH1B1P30837 517 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ELF1P32519 619 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 CYP2C19P33261 490 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 MCM5P33992 734 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 MCM2P49736 904 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SEPHS1P49903 392 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ATXN1P54253 815 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 PRR20EP86478 221 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PRR20CP86479 221 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PRR20DP86480 221 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PRR20BP86481 221 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PRR20AP86496 221 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ZBTB16Q05516 673 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 BTKQ06187 659 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SCRN1Q12765 414 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 STRN3Q13033 797 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PWP1Q13610 501 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 GTF2H3Q13889 308 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SCARB2Q14108 478 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SEMA3AQ14563 771 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ZSCAN26Q16670 478 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 KIF4BQ2VIQ3 1234 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PROX2Q3B8N5 592 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ANKDD1AQ495B1 522 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ODF2Q5BJF6 829 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 CAVIN4Q5BKX8 364 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SPDYCQ5MJ68 293 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SYDE2Q5VT97 1194 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PCNX4Q63HM2 1172 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 MCTP1Q6DN14 999 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 NAA16Q6N069 864 aaPredicted RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 ZSCAN25Q6NSZ9 544 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 FAM173BQ6P4H8 233 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ANGPTL8Q6UXH0 198 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 DSTYKQ6XUX3 929 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ARHGEF18Q6ZSZ5 1173 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 NEK10Q6ZWH5 1172 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 DHX32Q7L7V1 743 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 STRA8Q7Z7C7 330 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SLC9B2Q86UD5 537 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 C2CD5Q86YS7 1000 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 EPHX4Q8IUS5 362 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 CCDC65Q8IXS2 484 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 CBARPQ8N350 705 aaPredicted RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 DCLK2Q8N568 766 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 NAT8LQ8N9F0 302 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ST13P5Q8NFI4 369 aaPredicted RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 OR52K2Q8NGK3 314 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 FBXO30Q8TB52 745 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 TBC1D16Q8TBP0 767 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 KCTD13Q8WZ19 329 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 BAP1Q92560 729 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 GTF3C6Q969F1 213 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ZNF669Q96BR6 464 aaPredicted RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 NSUN4Q96CB9 384 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 INTS4Q96HW7 963 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 DHTKD1Q96HY7 919 aaPredicted RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 GMCL1Q96IK5 515 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SHDQ96IW2 340 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 EAF1Q96JC9 268 aaPredicted RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 ASB2Q96Q27 587 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 CRAMP1Q96RY5 1269 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 CHCHD6Q9BRQ6 235 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ZKSCAN3Q9BRR0 538 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 RIOK1Q9BRS2 568 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 PI4K2AQ9BTU6 479 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 MYL10Q9BUA6 226 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 CRB3Q9BUF7 120 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 TARS2Q9BW92 718 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 ANKRD2Q9GZV1 360 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 KIAA1683Q9H0B3 1180 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 TNKS2Q9H2K2 1166 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 NCOR1P1Q9H4R4 102 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 BRD9Q9H8M2 597 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 VPS37BQ9H9H4 285 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 TRPV4Q9HBA0 871 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 VEZTQ9HBM0 779 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 TCF7L1Q9HCS4 588 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms