RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 C17orf75Q9HAS0 396 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 SETD4Q9NVD3 440 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 HDAC6Q9UBN7 1215 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 KCNG1Q9UIX4 513 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 MAN1B1Q9UKM7 699 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 OGDHLQ9ULD0 1010 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 PCDHGC3Q9UN70 934 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 PHF24Q9UPV7 400 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 UBE4BO95155 1302 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 MROH7Q68CQ1 1323 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 PHLPP2Q6ZVD8 1323 aa7.27□□□□□ -1.25
CTDNEP1-204ENST00000570484 HAS3O00219 553 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 PSMA7O14818 248 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 TLR3O15455 904 aaKnown RBP7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 LILRB3O75022 631 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 RHOBTB3O94955 611 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 STBD1O95210 358 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 GCNT3O95395 438 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 SGPL1O95470 568 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 SCP2P22307 547 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 KLRC1P26715 233 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 PHKA2P46019 1235 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 GJA8P48165 433 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 PEX3P56589 373 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 RTP1P59025 263 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 NLRP12P59046 1061 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 PTPN11Q06124 597 aaPredicted RBP7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 TYRO3Q06418 890 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 STRN3Q13033 797 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 PSMD2Q13200 908 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 TARBP2Q15633 366 aaKnown RBP7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZNF658Q5TYW1 1059 aaPredicted RBP7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 IER5Q5VY09 327 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 EFCAB12Q6NXP0 572 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 RBM43Q6ZSC3 357 aaKnown RBP7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 RHPN2Q8IUC4 686 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 ANKLE1Q8NAG6 615 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 MLKLQ8NB16 471 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 BICD1Q96G01 975 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 PCMTD1Q96MG8 357 aaPredicted RBP7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 NLRP4Q96MN2 994 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 TSG101Q99816 390 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 C2orf40Q9H1Z8 148 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 TSPY26PQ9H489 355 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 SLC39A2Q9NP94 309 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 GPRC5CQ9NQ84 441 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 KMT5AQ9NQR1 393 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 XPNPEP1Q9NQW7 623 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 OLFML3Q9NRN5 406 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 TBC1D7Q9P0N9 293 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 SUCLA2Q9P2R7 463 aaPredicted RBP7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 GTF2IRD1Q9UHL9 959 aa7.26□□□□□ -1.25
CTDNEP1-204ENST00000570484 SMIM35A0A1B0GVV1 85 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 BICDL2A1A5D9 508 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 FRMD3A2A2Y4 597 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 SFI1A8K8P3 1242 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 RSPH10B2B2RC85 870 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZBTB42B2RXF5 422 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 EIF3DO15371 548 aaKnown RBP eCLIP7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 RNF40O75150 1001 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 CAVIN2O95810 425 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 RSPH10BP0C881 870 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 NAMPTP43490 491 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZNF131P52739 623 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 EFNA5P52803 228 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 TPM4P67936 248 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 CDC42EP1Q00587 391 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 MAPK7Q13164 816 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 MORC3Q14149 939 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 PTGISQ16647 500 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 TPD52L1Q16890 204 aaPredicted RBP7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 DPCR1Q3MIW9 517 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 ARSHQ5FYA8 562 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 NT5DC1Q5TFE4 455 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 ISM2Q6H9L7 571 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 CCSAPQ6IQ19 270 aaPredicted RBP7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 KLHL10Q6JEL2 608 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 LRSAM1Q6UWE0 723 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 SESTD1Q86VW0 696 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 MYOCDQ8IZQ8 938 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 SYCP3Q8IZU3 236 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 RNF149Q8NC42 400 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 SPATA20Q8TB22 786 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 PPP1R13LQ8WUF5 828 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 HVCN1Q96D96 273 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 DNAJC19Q96DA6 116 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 PPP1R16BQ96T49 567 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 SENP6Q9GZR1 1112 aaPredicted RBP7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 EXOC7Q9UPT5 735 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 CTNND2Q9UQB3 1225 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 GINS2Q9Y248 185 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 PCDHA2Q9Y5H9 948 aa7.25□□□□□ -1.25
CTDNEP1-204ENST00000570484 MCM3APO60318 1980 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 IGKV6-21A0A0C4DH24 114 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 DENND3A2RUS2 1198 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 MBLAC1A4D2B0 266 aaPredicted RBP7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 BECN2A8MW95 431 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 DCDC2CA8MYV0 355 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 INO80B-WBP1J3KQ70 363 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 ARVCFO00192 962 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms