RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 PPM1EQ8WY54 764 aa8.37□□□□□ -1.07
CNOT1-222ENST00000570139 KAZALD1Q96I82 304 aa8.37□□□□□ -1.07
CNOT1-222ENST00000570139 CHAMP1Q96JM3 812 aa8.37□□□□□ -1.07
CNOT1-222ENST00000570139 LRGUKQ96M69 825 aa8.37□□□□□ -1.07
CNOT1-222ENST00000570139 NYXQ9GZU5 481 aa8.37□□□□□ -1.07
CNOT1-222ENST00000570139 PCIF1Q9H4Z3 704 aa8.37□□□□□ -1.07
CNOT1-222ENST00000570139 ANLNQ9NQW6 1124 aa8.37□□□□□ -1.07
CNOT1-222ENST00000570139 SAP30BPQ9UHR5 308 aaKnown RBP8.37□□□□□ -1.07
CNOT1-222ENST00000570139 INTUQ9ULD6 942 aa8.37□□□□□ -1.07
CNOT1-222ENST00000570139 CBLCQ9ULV8 474 aa8.37□□□□□ -1.07
CNOT1-222ENST00000570139 TIMM13Q9Y5L4 95 aaPredicted RBP8.37□□□□□ -1.07
CNOT1-222ENST00000570139 TUBGCP6Q96RT7 1819 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 TTC41PQ6P2S7 1318 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 SSU72P8A0A1W2PR75 194 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 CCDC189A1A4V9 331 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 PPFIA4O75335 1185 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 KRT37O76014 449 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 CIAO1O76071 339 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 FAM87AP0C7U9 286 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 BMP3P12645 472 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 AKAP5P24588 427 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 GMPRP36959 345 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 RPL11P62913 178 aaKnown RBP8.36□□□□□ -1.07
CNOT1-222ENST00000570139 NRG1Q02297 640 aaPredicted RBP8.36□□□□□ -1.07
CNOT1-222ENST00000570139 GRM3Q14832 879 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 CLUL1Q15846 466 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 HLFQ16534 295 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 CYP2R1Q6VVX0 501 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 CLASRPQ8N2M8 674 aaKnown RBP8.36□□□□□ -1.07
CNOT1-222ENST00000570139 ZNF610Q8N9Z0 462 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 UTP4Q969X6 686 aaKnown RBP8.36□□□□□ -1.07
CNOT1-222ENST00000570139 LENG1Q96BZ8 264 aaPredicted RBP8.36□□□□□ -1.07
CNOT1-222ENST00000570139 EVI5LQ96CN4 794 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 MYRFLQ96LU7 910 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 ELAC2Q9BQ52 826 aaKnown RBP8.36□□□□□ -1.07
CNOT1-222ENST00000570139 UTP14AQ9BVJ6 771 aaKnown RBP8.36□□□□□ -1.07
CNOT1-222ENST00000570139 TAGLN3Q9UI15 199 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 TRMT112Q9UI30 125 aaKnown RBP8.36□□□□□ -1.07
CNOT1-222ENST00000570139 EXOC6BQ9Y2D4 811 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 CAPN6Q9Y6Q1 641 aa8.36□□□□□ -1.07
CNOT1-222ENST00000570139 CASZ1Q86V15 1759 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 UBN2Q6ZU65 1347 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 USP42Q9H9J4 1324 aaKnown RBP8.35□□□□□ -1.07
CNOT1-222ENST00000570139 GOLGA8AA7E2F4 631 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 GOLGA8BA8MQT2 603 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 FGF10O15520 208 aaPredicted RBP8.35□□□□□ -1.07
CNOT1-222ENST00000570139 HIP1RO75146 1068 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 LEFTY1O75610 366 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 TBC1D8O95759 1140 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 CSF1RP07333 972 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 SRFP11831 508 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 PDE6AP16499 860 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 MX1P20591 662 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 IL15P40933 162 aaPredicted RBP8.35□□□□□ -1.07
CNOT1-222ENST00000570139 FOXO4P98177 505 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 IRF9Q00978 393 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 ODF1Q14990 250 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 INF2Q27J81 1249 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 CCDC57Q2TAC2 916 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 RRP12Q5JTH9 1297 aaKnown RBP8.35□□□□□ -1.07
CNOT1-222ENST00000570139 RTP2Q5QGT7 225 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 IFIT1BQ5T764 474 aaKnown RBP8.35□□□□□ -1.07
CNOT1-222ENST00000570139 CASC1Q6TDU7 716 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 SHISA2Q6UWI4 295 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 LMBR1LQ6UX01 489 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 LINC00114Q6XXX2 140 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 KIAA1958Q8N8K9 716 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 PTCHD1Q96NR3 888 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 STRBPQ96SI9 672 aaKnown RBP8.35□□□□□ -1.07
CNOT1-222ENST00000570139 CSRNP2Q9H175 543 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 GPR108Q9NPR9 543 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 TOPORSQ9NS56 1045 aaPredicted RBP8.35□□□□□ -1.07
CNOT1-222ENST00000570139 RGS17Q9UGC6 210 aaPredicted RBP8.35□□□□□ -1.07
CNOT1-222ENST00000570139 STAP2Q9UGK3 403 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 MKL2Q9ULH7 1088 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 NIP7Q9Y221 180 aaKnown RBP eCLIP8.35□□□□□ -1.07
CNOT1-222ENST00000570139 CARMIL3Q8ND23 1372 aa8.35□□□□□ -1.07
CNOT1-222ENST00000570139 SALL3Q9BXA9 1300 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 H7BY64 318 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 OFD1O75665 1012 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 NTSR2O95665 410 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 SYPP08247 313 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 RFC4P35249 363 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 RFX5P48382 616 aaPredicted RBP8.34□□□□□ -1.07
CNOT1-222ENST00000570139 CTSWP56202 376 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 SMAD3P84022 425 aaKnown RBP8.34□□□□□ -1.07
CNOT1-222ENST00000570139 SPIRE1Q08AE8 756 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 IFIT5Q13325 482 aaKnown RBP8.34□□□□□ -1.07
CNOT1-222ENST00000570139 RAPGEF1Q13905 1077 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 ACAP2Q15057 778 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 NFKBIBQ15653 356 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 GPR19Q15760 415 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 SMAD2Q15796 467 aaKnown RBP8.34□□□□□ -1.07
CNOT1-222ENST00000570139 TXNRD1Q16881 649 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 PTF1AQ7RTS3 328 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 TICAM2Q86XR7 235 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 ZZZ3Q8IYH5 903 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 NAT16Q8N8M0 369 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 ENAHQ8N8S7 591 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms