RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CEP57L1Q8IYX8 460 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 ATP11CQ8NB49 1132 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 TRMT2BQ96GJ1 504 aaKnown RBP7.22□□□□□ -1.25
SMG1-217ENST00000569764 POP1Q99575 1024 aaKnown RBP7.22□□□□□ -1.25
SMG1-217ENST00000569764 YIPF4Q9BSR8 244 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 TSEN34Q9BSV6 310 aaKnown RBP7.22□□□□□ -1.25
SMG1-217ENST00000569764 ADAM33Q9BZ11 813 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 HMG20BQ9P0W2 317 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 PASKQ96RG2 1323 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.22□□□□□ -1.25
SMG1-217ENST00000569764 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.22□□□□□ -1.25
SMG1-217ENST00000569764 FAM170AA1A519 330 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 GH1P01241 217 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 IMPDH2P12268 514 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 USP8P40818 1118 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 ROR1Q01973 937 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 KRT17Q04695 432 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 GABPB1Q06547 395 aaPredicted RBP7.22□□□□□ -1.25
SMG1-217ENST00000569764 PKN1Q16512 942 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 TMEM259Q4ZIN3 620 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 SNRNP48Q6IEG0 339 aaKnown RBP7.22□□□□□ -1.25
SMG1-217ENST00000569764 POF1BQ8WVV4 589 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 ALKBH8Q96BT7 664 aaKnown RBP7.22□□□□□ -1.25
SMG1-217ENST00000569764 MMTAG2Q9BU76 263 aaKnown RBP7.22□□□□□ -1.25
SMG1-217ENST00000569764 NYAP2Q9P242 653 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 TTLL3Q9Y4R7 772 aa7.22□□□□□ -1.25
SMG1-217ENST00000569764 BTBD19C9JJ37 291 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 GADD45BO75293 160 aaPredicted RBP7.21□□□□□ -1.25
SMG1-217ENST00000569764 FGBP02675 491 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 ETFBP38117 255 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 ERVK-9P63128 1117 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 ERVK-24P63145 666 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 FOXK1P85037 733 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 IQSEC1Q6DN90 963 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 HS2ST1Q7LGA3 356 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 SLC7A5P1Q8MH63 180 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 CCDC26Q8TAB7 109 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 ANAPC16Q96DE5 110 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 GMLQ99445 158 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 VTA1Q9NP79 307 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 SEPT11Q9NVA2 429 aaKnown RBP7.21□□□□□ -1.25
SMG1-217ENST00000569764 GGT7Q9UJ14 662 aa7.21□□□□□ -1.25
SMG1-217ENST00000569764 TMEM232C9JQI7 657 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 NDC80O14777 642 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 STAM2O75886 525 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 PDE6AP16499 860 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 FPGSQ05932 587 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 IQCB1Q15051 598 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 KBTBD12Q3ZCT8 623 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 GALNT13Q8IUC8 556 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 AFAP1L1Q8TED9 768 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 ARMC5Q96C12 935 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 MTG1Q9BT17 334 aaPredicted RBP7.21□□□□□ -1.26
SMG1-217ENST00000569764 ASCC2Q9H1I8 757 aaPredicted RBP7.21□□□□□ -1.26
SMG1-217ENST00000569764 SENP2Q9HC62 589 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 RAB23Q9ULC3 237 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 COL24A1Q17RW2 1714 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 TGDSO95455 350 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 NASPP49321 788 aaPredicted RBP7.21□□□□□ -1.26
SMG1-217ENST00000569764 EVX2Q03828 476 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 WDR44Q5JSH3 913 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 FAM173BQ6P4H8 233 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 SH3GL3Q99963 347 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 RNF146Q9NTX7 359 aa7.21□□□□□ -1.26
SMG1-217ENST00000569764 ZNF624Q9P2J8 865 aaPredicted RBP7.21□□□□□ -1.26
SMG1-217ENST00000569764 ZBTB43O43298 467 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 ZSCAN22P10073 491 aaPredicted RBP7.2□□□□□ -1.26
SMG1-217ENST00000569764 HTRA3P83110 453 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 TNFAIP2Q03169 654 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 DIXDC1Q155Q3 683 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 SIX5Q8N196 739 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 ZNF384Q8TF68 577 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 JRKLQ9Y4A0 524 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 PTCH2Q9Y6C5 1203 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 UBR3Q6ZT12 1888 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 TMEM265A0A087WTH1 108 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 TCRBV5S4A2TA0A5A2 114 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 RRN3P2A6NIE6 340 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 GDF11O95390 407 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 PTPRAP18433 802 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 SYT1P21579 422 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 FGFR4P22455 802 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 RPS6KB1P23443 525 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 GALNSP34059 522 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 CSE1LP55060 971 aaKnown RBP7.2□□□□□ -1.26
SMG1-217ENST00000569764 HAND2P61296 217 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 TMEM67Q5HYA8 995 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 ADGRA1Q86SQ6 560 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 OR6J1Q8NGC5 347 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 OR8H1Q8NGG4 311 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 CEP70Q8NHQ1 597 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMG1-217ENST00000569764 EMID1Q96A84 441 aaPredicted RBP7.2□□□□□ -1.26
SMG1-217ENST00000569764 GPATCH1Q9BRR8 931 aaKnown RBP7.2□□□□□ -1.26
SMG1-217ENST00000569764 FNIP2Q9P278 1114 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 DDX20Q9UHI6 824 aaKnown RBP7.2□□□□□ -1.26
SMG1-217ENST00000569764 PCDHA1Q9Y5I3 950 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 EMSYQ7Z589 1322 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 JAK2O60674 1132 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 USP2O75604 605 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms