RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 TMEM143Q96AN5 459 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 MAP7D2Q96T17 732 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 C11orf49Q9H6J7 331 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 EXOC1Q9NV70 894 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 PANK4Q9NVE7 773 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 LARSQ9P2J5 1176 aaKnown RBP11.54□□□□□ -0.56
CDH3-210ENST00000569117 DNAH12Q6ZR08 3092 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 C3orf80F5H4A9 247 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 B4GALT4O60513 344 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 LETM1O95202 739 aaPredicted RBP11.53□□□□□ -0.56
CDH3-210ENST00000569117 MAPTP10636 758 aaKnown RBP11.53□□□□□ -0.56
CDH3-210ENST00000569117 GLRA2P23416 452 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 NAMPTP43490 491 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 ZNF200P98182 395 aaPredicted RBP11.53□□□□□ -0.56
CDH3-210ENST00000569117 DMP1Q13316 513 aaPredicted RBP11.53□□□□□ -0.56
CDH3-210ENST00000569117 CAPSQ13938 189 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 MXD4Q14582 209 aaPredicted RBP11.53□□□□□ -0.56
CDH3-210ENST00000569117 PTGISQ16647 500 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 ZSCAN23Q3MJ62 389 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 KMT5BQ4FZB7 885 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 FAM26FQ5R3K3 315 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 COL13A1Q5TAT6 717 aaPredicted RBP11.53□□□□□ -0.56
CDH3-210ENST00000569117 RUFY4Q6ZNE9 571 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 RPAINQ86UA6 219 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 FAM126BQ8IXS8 530 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 METTL13Q8N6R0 699 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 ASAP3Q8TDY4 903 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 ADAMTS19Q8TE59 1207 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 BSNDQ8WZ55 320 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 KCNN1Q92952 543 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 FIZ1Q96SL8 496 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 GTPBP4Q9BZE4 634 aaKnown RBP11.53□□□□□ -0.56
CDH3-210ENST00000569117 SENP6Q9GZR1 1112 aaPredicted RBP11.53□□□□□ -0.56
CDH3-210ENST00000569117 ZHX3Q9H4I2 956 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 TMEM134Q9H6X4 195 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 SUGCTQ9HAC7 445 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 MAN1B1Q9UKM7 699 aa11.53□□□□□ -0.56
CDH3-210ENST00000569117 ASAP2O43150 1006 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 CAND2O75155 1236 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 CD4P01730 458 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 SCP2P22307 547 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 NPTX2P47972 431 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 GPC3P51654 580 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 NCKAP1LP55160 1127 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 RBL2Q08999 1139 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 LAMTOR4Q0VGL1 99 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 PSMD2Q13200 908 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 PTK7Q13308 1070 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 MORC3Q14149 939 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 HERC4Q5GLZ8 1057 aaPredicted RBP11.52□□□□□ -0.57
CDH3-210ENST00000569117 ODR4Q5SWX8 454 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 SLC39A5Q6ZMH5 540 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 ANKRD33Q7Z3H0 272 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 NECAB2Q7Z6G3 386 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 FAM178BQ8IXR5 827 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 KIAA0319LQ8IZA0 1049 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 MYCT1Q8N699 235 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 SLC17A8Q8NDX2 589 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 PRPF31Q8WWY3 499 aaKnown RBP11.52□□□□□ -0.57
CDH3-210ENST00000569117 PAWRQ96IZ0 340 aaKnown RBP11.52□□□□□ -0.57
CDH3-210ENST00000569117 IFT74Q96LB3 600 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 FAM49AQ9H0Q0 323 aaPredicted RBP11.52□□□□□ -0.57
CDH3-210ENST00000569117 ST6GALNAC4Q9H4F1 302 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 TRMT13Q9NUP7 481 aaKnown RBP11.52□□□□□ -0.57
CDH3-210ENST00000569117 SUCLA2Q9P2R7 463 aaPredicted RBP11.52□□□□□ -0.57
CDH3-210ENST00000569117 KCNG1Q9UIX4 513 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 NOD1Q9Y239 953 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 AKT3Q9Y243 479 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 UBE4BO95155 1302 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 ADGRA3Q8IWK6 1321 aa11.52□□□□□ -0.57
CDH3-210ENST00000569117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.51□□□□□ -0.57
CDH3-210ENST00000569117 SYCE3A1L190 88 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 SFI1A8K8P3 1242 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 H0YCG3 227 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 K7ENM7 598 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 VTNP04004 478 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 ABCD1P33897 745 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 PEX3P56589 373 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 POU5F1BQ06416 359 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 ALCAMQ13740 583 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 TFDP1Q14186 410 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 TRIM71Q2Q1W2 868 aaKnown RBP11.51□□□□□ -0.57
CDH3-210ENST00000569117 COBLL1Q53SF7 1204 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 ZNF658Q5TYW1 1059 aaPredicted RBP11.51□□□□□ -0.57
CDH3-210ENST00000569117 CDCA2Q69YH5 1023 aaPredicted RBP11.51□□□□□ -0.57
CDH3-210ENST00000569117 RSPH3Q86UC2 560 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 ZNF410Q86VK4 478 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 RHPN2Q8IUC4 686 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 NME8Q8N427 588 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 RDH13Q8NBN7 331 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 KIAA0895Q8NCT3 520 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 DNAJB3Q8WWF6 145 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 DHX38Q92620 1227 aaKnown RBP11.51□□□□□ -0.57
CDH3-210ENST00000569117 TATDN2Q93075 761 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 WNT8BQ93098 351 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 HPS3Q969F9 1004 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 ABHD8Q96I13 439 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 TOX2Q96NM4 488 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 NTPCRQ9BSD7 190 aaKnown RBP11.51□□□□□ -0.57
CDH3-210ENST00000569117 NFKBIZQ9BYH8 718 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms