RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 FAM129CQ86XR2 697 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 DENND1CQ8IV53 801 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 SAMD3Q8N6K7 520 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 CPA5Q8WXQ8 436 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 HAPLN2Q9GZV7 340 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 ZNF552Q9H707 407 aaPredicted RBP7.32□□□□□ -1.24
UBR1-208ENST00000569066 CNTD2Q9H8S5 307 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 TAGLN3Q9UI15 199 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 PCDHA5Q9Y5H7 936 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 UBXN7O94888 489 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 IFIT2P09913 472 aaKnown RBP7.31□□□□□ -1.24
UBR1-208ENST00000569066 SLC5A1P13866 664 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 SERPINB3P29508 390 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 LIMS1P48059 325 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 CDR1P51861 262 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 CD69Q07108 199 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 PICALMQ13492 652 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 LDHDQ86WU2 507 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 DYDC2Q96IM9 177 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 NT5C1BQ96P26 610 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 FAM193BQ96PV7 902 aaPredicted RBP7.31□□□□□ -1.24
UBR1-208ENST00000569066 ARPC5LQ9BPX5 153 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 BHMT2Q9H2M3 363 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 CROTQ9UKG9 612 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 B3GALT2O43825 422 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 PAPLNO95428 1278 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 HNRNPLP14866 589 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBR1-208ENST00000569066 STAT5BP51692 787 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 SMAD4Q13485 552 aaKnown RBP7.31□□□□□ -1.24
UBR1-208ENST00000569066 NOMO1Q15155 1222 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 MUM1L1Q5H9M0 696 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 MPZL3Q6UWV2 235 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 OTOP2Q7RTS6 562 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 HIST1H2AHQ96KK5 128 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 HIST1H2AJQ99878 128 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 FNIP2Q9P278 1114 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 DAAM1Q9Y4D1 1078 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 PCDHB1Q9Y5F3 818 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 COMMD10Q9Y6G5 202 aa7.31□□□□□ -1.24
UBR1-208ENST00000569066 BMP8AQ7Z5Y6 402 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 IGDCC3Q8IVU1 814 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 TTC17Q96AE7 1141 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 C1GALT1C1Q96EU7 318 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 CGRRF1Q99675 332 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 NAA15Q9BXJ9 866 aaKnown RBP7.3□□□□□ -1.24
UBR1-208ENST00000569066 MBD1Q9UIS9 605 aaPredicted RBP7.3□□□□□ -1.24
UBR1-208ENST00000569066 IRS2Q9Y4H2 1338 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 SCO2A0A1W2PP80 73 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 H3BML4 177 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 ABLIM1O14639 778 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 TUSC2O75896 110 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 WDR72Q3MJ13 1102 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 GRAMD4Q6IC98 578 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 BTNL9Q6UXG8 535 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 NPNTQ6UXI9 565 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 ABHD15Q6UXT9 468 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 FATE1Q969F0 183 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 TMEM209Q96SK2 561 aa7.3□□□□□ -1.24
UBR1-208ENST00000569066 HTR1BP28222 390 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 KIAA0753Q2KHM9 967 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 GLB1L2Q8IW92 636 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 PLBD2Q8NHP8 589 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 WDR48Q8TAF3 677 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 ZNF700Q9H0M5 742 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 GREM2Q9H772 168 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 POLR3BQ9NW08 1133 aaPredicted RBP7.29□□□□□ -1.24
UBR1-208ENST00000569066 SIRT5Q9NXA8 310 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.29□□□□□ -1.24
UBR1-208ENST00000569066 POLHQ9Y253 713 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 NR2E3Q9Y5X4 410 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 DTNBO60941 627 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 ZBED1O96006 694 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 MLLT6P55198 1093 aaPredicted RBP7.29□□□□□ -1.24
UBR1-208ENST00000569066 DSC2Q02487 901 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 NFATC3Q12968 1075 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 DGKDQ16760 1214 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 PRR23BQ6ZRT6 265 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 Q6ZVL8 140 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 RHOT1Q8IXI2 618 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 C11orf84Q9BUA3 381 aaPredicted RBP7.29□□□□□ -1.24
UBR1-208ENST00000569066 ADI1Q9BV57 179 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 FAM204AQ9H8W3 233 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 PHTF1Q9UMS5 762 aa7.29□□□□□ -1.24
UBR1-208ENST00000569066 FAM227AF5H4B4 570 aa7.28□□□□□ -1.24
UBR1-208ENST00000569066 COL6A1P12109 1028 aa7.28□□□□□ -1.24
UBR1-208ENST00000569066 IGFBP6P24592 240 aaPredicted RBP7.28□□□□□ -1.24
UBR1-208ENST00000569066 ADSLP30566 484 aaPredicted RBP7.28□□□□□ -1.24
UBR1-208ENST00000569066 MAP2K6P52564 334 aa7.28□□□□□ -1.24
UBR1-208ENST00000569066 RSAD2Q8WXG1 361 aa7.28□□□□□ -1.24
UBR1-208ENST00000569066 MCOLN1Q9GZU1 580 aa7.28□□□□□ -1.24
UBR1-208ENST00000569066 NSUN3Q9H649 340 aaKnown RBP7.28□□□□□ -1.24
UBR1-208ENST00000569066 ARMT1Q9H993 441 aa7.28□□□□□ -1.24
UBR1-208ENST00000569066 LY86O95711 162 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 SLC6A9P48067 706 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 MGAT2Q10469 447 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 OS9Q13438 667 aaPredicted RBP7.27□□□□□ -1.24
UBR1-208ENST00000569066 OLFML2BQ68BL8 750 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 B3GNT8Q7Z7M8 397 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 MORC1Q86VD1 984 aa7.27□□□□□ -1.24
UBR1-208ENST00000569066 SMC5Q8IY18 1101 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms