RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 NTRK3Q16288 839 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 MTERF2Q49AM1 385 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 MOXD1Q6UVY6 613 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 C15orf39Q6ZRI6 1047 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 CCDC149Q6ZUS6 474 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 GPR149Q86SP6 731 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 URGCPQ8TCY9 931 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 PHKBQ93100 1093 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 CEP89Q96ST8 783 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 FDXACB1Q9BRP7 624 aaPredicted RBP17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 NRDE2Q9H7Z3 1164 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 KANSL3Q9P2N6 904 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 SUCLA2Q9P2R7 463 aaPredicted RBP17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 DPP7Q9UHL4 492 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 PPME1Q9Y570 386 aa17.69■□□□□ 0.42
HERPUD1-215ENST00000568676 OFD1O75665 1012 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 ASGR2P07307 311 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 NLRP5P59047 1200 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 DRP2Q13474 957 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 PTPN14Q15678 1187 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 ELMSAN1Q6PJG2 1045 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 B3GNT9Q6UX72 402 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 CYP26C1Q6V0L0 522 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 CATSPER4Q7RTX7 472 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 TMEM173Q86WV6 379 aaPredicted RBP17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 RHPN2Q8IUC4 686 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 C12orf76Q8N812 135 aaPredicted RBP17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 TBCKQ8TEA7 893 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 TMEM175Q9BSA9 504 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 SLC26A6Q9BXS9 759 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 SSX2IPQ9Y2D8 614 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 CNTNAP2Q9UHC6 1331 aa17.68■□□□□ 0.42
HERPUD1-215ENST00000568676 PRR23AA6NEV1 266 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 SPDYE4A6NLX3 237 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 EDIL3O43854 480 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 CSDE1O75534 798 aaKnown RBP17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 WEE2P0C1S8 567 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 PSMA5P28066 241 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 PSMC5P62195 406 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 TDGQ13569 410 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 TRIM22Q8IYM9 498 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 AUTS2Q8WXX7 1259 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 RHOBTB2Q9BYZ6 727 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 AGPAT5Q9NUQ2 364 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 IGSF9Q9P2J2 1179 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 PCDHA4Q9UN74 947 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 INPP5FQ9Y2H2 1132 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 PLXNA3P51805 1871 aa17.67■□□□□ 0.42
HERPUD1-215ENST00000568676 ZFHX2Q9C0A1 2572 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 STBD1O95210 358 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 ALDH2P05091 517 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 RPS6KB1P23443 525 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 KLRC2P26717 231 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 CLCN4P51793 760 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 EVCP57679 992 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 IRX6P78412 446 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 GALNT17Q6IS24 598 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 TMC5Q6UXY8 1006 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 ASCL5Q7RTU5 278 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 CNNM3Q8NE01 707 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 CMASQ8NFW8 434 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 SLC7A3Q8WY07 619 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 LPPQ93052 612 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 NKD2Q969F2 451 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 MBOAT7Q96N66 472 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 FAM193BQ96PV7 902 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 RTP3Q9BQQ7 232 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 UBN1Q9NPG3 1134 aa17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 MRPL17Q9NRX2 175 aaKnown RBP17.66■□□□□ 0.42
HERPUD1-215ENST00000568676 DENND4AQ7Z401 1863 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 DDX11L8A8MPP1 907 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 GAS2O43903 313 aaKnown RBP17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 AOC1P19801 751 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 HSPA4P34932 840 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 SLC11A1P49279 550 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 PCBP1Q15365 356 aaKnown RBP eCLIP17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 ANO5Q75V66 913 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 SRGAP1Q7Z6B7 1085 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 MRPL10Q7Z7H8 261 aaKnown RBP17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 NLRP4Q96MN2 994 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 KLHL5Q96PQ7 755 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 GBP3Q9H0R5 595 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 RSAD1Q9HA92 442 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 IFT122Q9HBG6 1241 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 DNAJB4Q9UDY4 337 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 DUSP12Q9UNI6 340 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 FAN1Q9Y2M0 1017 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 PCDHB2Q9Y5E7 798 aa17.65■□□□□ 0.42
HERPUD1-215ENST00000568676 MYO10Q9HD67 2058 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 C1RP00736 705 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 CPA1P15085 419 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 NONOQ15233 471 aaKnown RBP eCLIP17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 LETM2Q2VYF4 491 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 AGMOQ6ZNB7 445 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 CENPQQ7L2Z9 268 aaPredicted RBP17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 DAGLBQ8NCG7 672 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 ETNPPLQ8TBG4 499 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 BCL7CQ8WUZ0 217 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms