RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 NEMFO60524 1076 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 EYA4O95677 639 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 SRGAP2BP0DMP2 458 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 ATF7P17544 494 aaPredicted RBP16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 TXKP42681 527 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 RAB27AP51159 221 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 SPIRE1Q08AE8 756 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 COASYQ13057 564 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 BMS1Q14692 1282 aaKnown RBP16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 EMC2Q15006 297 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 DUSP6Q16828 381 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 LONRF3Q496Y0 759 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 GLB1LQ6UWU2 654 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 TMC7Q7Z402 723 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 SRGAP1Q7Z6B7 1085 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 PGBD4Q96DM1 585 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 CCDC43Q96MW1 224 aaKnown RBP16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 MTRQ99707 1265 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 TTC12Q9H892 705 aaPredicted RBP16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 IFT122Q9HBG6 1241 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 FAM105AQ9NUU6 356 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 RAPGEFL1Q9UHV5 662 aa16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 BARX2Q9UMQ3 279 aaPredicted RBP16.7■□□□□ 0.26
CCNDBP1-213ENST00000568507 FAM86C2PA6NEL3 165 aa16.69■□□□□ 0.26
CCNDBP1-213ENST00000568507 ATP2B1P20020 1258 aa16.69■□□□□ 0.26
CCNDBP1-213ENST00000568507 BCAR1P56945 870 aa16.69■□□□□ 0.26
CCNDBP1-213ENST00000568507 LPPQ93052 612 aa16.69■□□□□ 0.26
CCNDBP1-213ENST00000568507 CARNS1A5YM72 827 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 ZBTB39O15060 712 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 DCXO43602 365 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 ZNF623O75123 536 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 GLP2RO95838 553 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 CA8P35219 290 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 RNASELQ05823 741 aaKnown RBP16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 NOMO2Q5JPE7 1267 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 FERMT3Q86UX7 667 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 CCDC83Q8IWF9 413 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 SLC39A11Q8N1S5 342 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 RNF149Q8NC42 400 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 SMRP1Q8NCR6 262 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 TMEM169Q96HH4 297 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 HSD17B14Q9BPX1 270 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 ANKEF1Q9NU02 776 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 AGPAT5Q9NUQ2 364 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 INPP5FQ9Y2H2 1132 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 PCDHB2Q9Y5E7 798 aa16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 FNDC1Q4ZHG4 1894 aaPredicted RBP16.68■□□□□ 0.26
CCNDBP1-213ENST00000568507 NT5C1B-RDH14C9J2C7 533 aa16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 ZC3H11AO75152 810 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 GUCY1B3Q02153 619 aa16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 NCBP1Q09161 790 aaKnown RBP16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 MXD4Q14582 209 aaPredicted RBP16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 TMEM87AQ8NBN3 555 aa16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 URGCPQ8TCY9 931 aa16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 C8orf76Q96K31 380 aa16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 ZSCAN31Q96LW9 406 aaPredicted RBP16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 LLPHQ9BRT6 129 aaKnown RBP16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 MINDY3Q9H8M7 445 aa16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 HCN4Q9Y3Q4 1203 aa16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 KIAA1671Q9BY89 1806 aa16.67■□□□□ 0.26
CCNDBP1-213ENST00000568507 HIDE1A8MVS5 230 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 OFD1O75665 1012 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 DGAT1O75907 488 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 ERLIN2O94905 339 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 LYPLA2O95372 231 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 MCM7P33993 719 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 TECP42680 631 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 TFDP1Q14186 410 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 LLGL2Q6P1M3 1020 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 MTMR9Q96QG7 549 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 C11orf16Q9NQ32 467 aa16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 USP15Q9Y4E8 981 aaPredicted RBP16.66■□□□□ 0.26
CCNDBP1-213ENST00000568507 CXCL14O95715 111 aa16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 RBM10P98175 930 aaKnown RBP16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 PCBP1Q15365 356 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 MRPL10Q7Z7H8 261 aaKnown RBP16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 MRPL43Q8N983 215 aaKnown RBP16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 VN1R2Q8NFZ6 395 aa16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 FAM193BQ96PV7 902 aaPredicted RBP16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 GBP3Q9H0R5 595 aa16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 NRDE2Q9H7Z3 1164 aa16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 TBC1D13Q9NVG8 400 aa16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 WDR81Q562E7 1941 aa16.65■□□□□ 0.26
CCNDBP1-213ENST00000568507 MEIS3P2A8K0S8 358 aa16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 PRR33A8MZF0 331 aa16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 WNT7AO00755 349 aa16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 XRCC6P12956 609 aaKnown RBP eCLIP16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 HOXA11P31270 313 aaPredicted RBP16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 PTENP60484 403 aa16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 HMGN5P82970 282 aaKnown RBP16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 ANKRD54Q6NXT1 300 aa16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 TMEM184AQ6ZMB5 413 aa16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 CNNM3Q8NE01 707 aa16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 PIGOQ8TEQ8 1089 aa16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 PHF7Q9BWX1 381 aaPredicted RBP16.64■□□□□ 0.26
CCNDBP1-213ENST00000568507 TMEM60Q9H2L4 133 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms