RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 EIF6P56537 245 aaKnown RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 JAM2P57087 298 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 PTENP60484 403 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 PPP2R2AP63151 447 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 GPC5P78333 572 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 SLC7A5Q01650 507 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 DR1Q01658 176 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 USP17L24Q0WX57 530 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CALCOCO2Q13137 446 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 NBPF9Q3BBW0 867 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 GKAP1Q5VSY0 366 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 DENND2CQ68D51 928 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 STYK1Q6J9G0 422 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 RINT1Q6NUQ1 792 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 XRRA1Q6P2D8 792 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 USP17L6PQ6QN14 398 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CYFIP1Q7L576 1253 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 KCNK18Q7Z418 384 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CCDC91Q7Z6B0 441 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 KLHL7Q8IXQ5 586 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CNPY4Q8N129 248 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 ANKRD13CQ8N6S4 541 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 GBP7Q8N8V2 638 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 LRRC57Q8N9N7 239 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 RDM1Q8NG50 284 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CCHCR1Q8TD31 782 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 LRRC15Q8TF66 581 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 U2AF1L4Q8WU68 220 aaKnown RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CRYGNQ8WXF5 182 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 SEC14L1Q92503 715 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 HPS3Q969F9 1004 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 SLC35C1Q96A29 364 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 HES6Q96HZ4 224 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CABS1Q96KC9 395 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 FOXP3Q9BZS1 431 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 VPS33BQ9H267 617 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CPVLQ9H3G5 476 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 C17orf75Q9HAS0 396 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 GPBP1L1Q9HC44 474 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 TBC1D22BQ9NU19 505 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 UVRAGQ9P2Y5 699 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 DBR1Q9UK59 544 aaKnown RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 FEM1BQ9UK73 627 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 DNAJC12Q9UKB3 198 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 NOC2LQ9Y3T9 749 aaKnown RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 CTDP1Q9Y5B0 961 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 PASKQ96RG2 1323 aa8.26□□□□□ -1.09
ATXN3-250ENST00000568290 ZC3H4Q9UPT8 1303 aaKnown RBP8.26□□□□□ -1.09
ATXN3-250ENST00000568290 BAZ2BQ9UIF8 2168 aaKnown RBP8.25□□□□□ -1.09
ATXN3-250ENST00000568290 THSD7AQ9UPZ6 1657 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 ATAD5Q96QE3 1844 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 A0A1B0GUA9 196 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 ADAMTS3O15072 1205 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 MSH4O15457 936 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 RAD51CO43502 376 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 RTN2O75298 545 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 FSBPO95073 299 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 P4HBP07237 508 aaKnown RBP8.25□□□□□ -1.09
ATXN3-250ENST00000568290 GLI1P08151 1106 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 PAEPP09466 180 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 MYBL1P10243 752 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 SFNP31947 248 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 SLC16A2P36021 539 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 FNTAP49354 379 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 CARSP49589 748 aaKnown RBP8.25□□□□□ -1.09
ATXN3-250ENST00000568290 SPIRE1Q08AE8 756 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 BFSP1Q12934 665 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 KIF22Q14807 665 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 CEP55Q53EZ4 464 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 ARSHQ5FYA8 562 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 ODR4Q5SWX8 454 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 FKBP1CQ5VVH2 108 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 ICE2Q659A1 982 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 TTBK2Q6IQ55 1244 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 APOBEC3HQ6NTF7 200 aaKnown RBP8.25□□□□□ -1.09
ATXN3-250ENST00000568290 CCDC174Q6PII3 467 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 ZNF720Q7Z2F6 126 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 ZNF571Q7Z3V5 609 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-250ENST00000568290 NT5DC3Q86UY8 548 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 TPH2Q8IWU9 490 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 CACNA2D3Q8IZS8 1091 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 UBLCP1Q8WVY7 318 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-250ENST00000568290 CASKIN2Q8WXE0 1202 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 SLC5A5Q92911 643 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 PGM2Q96G03 612 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 EEF2KMTQ96G04 330 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 LRCH3Q96II8 777 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 PSMB7Q99436 277 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 PSMD1Q99460 953 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 HSD17B14Q9BPX1 270 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 NUDT12Q9BQG2 462 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 ZNF577Q9BSK1 485 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 DEFB129Q9H1M3 183 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 KDM4CQ9H3R0 1056 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 ST6GALNAC4Q9H4F1 302 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 PPCSQ9HAB8 311 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 KIAA1586Q9HCI6 787 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 SAMD15Q9P1V8 674 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 USP20Q9Y2K6 914 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms